Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1439 ATGAAGCTGAATCCCTTCTGCATAGTTTTACCACCAAATTCTGGTGAAATGGTGGTGCCACTCGAAAAGGGTGTCCAACAAGAACCCTTTCAAACACCAAAGAAACAAGTTGAGGCCAAACAGCTTCACAGGGCATGTGGGGGGCAAGTTCTTGCTTCTCTTGGTGATTTTTTGGGCAAGTTGTATGACTCAGGGTGGTGGAGAATTTGCCAGAAAGGAGAGCACAAAGAGAAGCACAACTCTGGTGTGTTGTTTCATGATATGGACGGTGTGCAAGTTTCTGTCAACATTGGCAGGGACAACCCCAGAATTTTCAGCTATGCAGAGCTGTTCATAGGGTCCAATGGTTTCAGTGAAGACCAAGTTTTAGGGAGTGGAGGGTTTGGCAAAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACCGTGGTTGCTGTGAAGTGCTGTTTGGCAGGGAAAGGCAAGCAGTTTGAGAAAAGTTTTGCAGCAGAGTTAACAGCTGTAGCTGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTGTCAATGAAGATCAGTTGCATCTTGTTTATGACTACATGCCAAACCGAAGCCTTGACCGTGTACTATTTCGCAGGCATGAGAACTTGAAGGCTAAGCCTCTTCAATGGGGACAAAGAGGGAAGATTGTGAAGGGTTTGGCAGCTGCATTGTACTATCTCCATGAGCAATTAGAGACTCAAATCATTCATAGGGATGTTAAGAGCAGCAATGTGATGCTTGATTCCCATTACAATGCTCGGTTGGGTGACTTTGGCATGGCAAGGTGGCTAGAGCATGAGCTTGAGTATGAGTATAAGTATGACAACAGGAAAACAACATCAATCAGAAATGACCATTTCAGATTGGGAGAGACATCAAGAATTGGGGGCACAATTGGGTATCTTCCTCCTGAAAGCTTGCAGAAACCAAGCAATACTACCTCCAAATCTGATGTCTTCAGTTTTGGGATTGTTGTACTAGAGGTGGCGTCTGGAAGGAGAGCAATCGATCTTACGCAGCCAGATGAACAAATGATTTTGCTTGATTGGATTAGAAGGCTTTCTGATGAAGGGAAGCTTCTGGAAGCAGCTGATACAAGGCTACCAGATGGATCCTTCATGCTTTCAGAGATGCAGCATTTCATTCACACAGGCCTCCTCTGCACACTCCATGACCCACAATCGAGGCCAAACATGAAATGGGTTGTGGAAGCTCTTTCTGACATTTCTTTTAAACTACCAGCACTCCCTTCTTTTCTCTCCCACCCTTTATATATCTCTTTGTCTTCCCCATCTGATACTAGTCATAGTCCAAGCAGCACAAGTGGCACTAGCTCTACCACAGATAATGCAAGCATAATCACCACCAATACCTCATCAAACTATGTAACAGCCACAGGTGAAACTGTGTATGTAACCGCTGAGTACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGAACCACCACCGACCATTTCCTGTGATAGAAACTCCAAGAGAAATATCATACAAGGAGATTATTTCTGCTACAGATAACTTCTCCGATTCAAGAAGGGTGGCTGAGCTAGACTTTGGAACTGCGTACCATGGCATCCTTGATGACCAATGCCATGTTTTGGTGAAACGCCTTGGGATGAAGACATGTCCCGCACTGCGTGATAGATTCTCCAACGAACTCCGAAATCTGGGACGGCTTCGCCATAGGAATTTGGTTCAACTTCGTGGATGGTGCACTGAGCAAGGAGAGATGCTTGTTATTTATGATTACTCGGCAAGTAGAATTCTCAGCCAACTGCTTATGCATCATAACAATGGAAGTAGAAGTGGGGCTTCTTTCCTCCAATGGCATCACAGGTACAACATAGTGAAGGCACTGGCCTCTGCAGTACTCTATCTACATGAGGAATGGGATGAACAAGTGATCCACAGAAACATTACCTCTTCAGCTGTCATTCTTGAACAAGATATGAATCCAAGACTCAGCTCTTTTGCTCTAGCAGAATTTTTGTCAAGGAATGAGCATGGTCATCATGTAGTTGCTGACACTAGAAAATCGGTTCGTGGGATTTTCGGCTACATGTCTCCAGAATACGTGGAATCAGGTGAAGCAACCACTGAAGCTGATGTTTATAGTTTTGGTGTAGTGGTGCTTGAAGTTGTCAGTGGACAGATGGCAGTAGATTTTAGGCAACCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGACGAGAAAAAGACCATTGAAGGAATTAGCTGACATTAGACTCAATGGAGAATACAATGACCAAGAATTGATGAGATTAGTGGGGTTAGGAATTGCTTGCACCCGTTGCAACCCGCAGTTAAGACCAAGCATGAGACAAATAGTAAGCATTCTTGATGGCAATGACAAATTACTTGTCCATAATAACAAGGAGAGCAGGGAAGAATGGAGACAAAGAAATTACTGTTCTTTGTCAATGATTAAGAGAATCCAAGCTCTAGGAATACAGTAA 2526 0.4402 MKLNPFCIVLPPNSGEMVVPLEKGVQQEPFQTPKKQVEAKQLHRACGGQVLASLGDFLGKLYDSGWWRICQKGEHKEKHNSGVLFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGKVYKAVLPSDGTVVAVKCCLAGKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVNEDQLHLVYDYMPNRSLDRVLFRRHENLKAKPLQWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKSSNVMLDSHYNARLGDFGMARWLEHELEYEYKYDNRKTTSIRNDHFRLGETSRIGGTIGYLPPESLQKPSNTTSKSDVFSFGIVVLEVASGRRAIDLTQPDEQMILLDWIRRLSDEGKLLEAADTRLPDGSFMLSEMQHFIHTGLLCTLHDPQSRPNMKWVVEALSDISFKLPALPSFLSHPLYISLSSPSDTSHSPSSTSGTSSTTDNASIITTNTSSNYVTATGETVYVTAEYKNSEIISSKSMNHHRPFPVIETPREISYKEIISATDNFSDSRRVAELDFGTAYHGILDDQCHVLVKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSQLLMHHNNGSRSGASFLQWHHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVVADTRKSVRGIFGYMSPEYVESGEATTEADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFETRKRPLKELADIRLNGEYNDQELMRLVGLGIACTRCNPQLRPSMRQIVSILDGNDKLLVHNNKESREEWRQRNYCSLSMIKRIQALGIQ* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1439 841 ProSiteProfiles Protein kinase domain profile. 522 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1439 841 PANTHER - 3 840 - -
Pvu8g1439 841 Pfam Protein tyrosine and serine/threonine kinase 528 802 IPR001245 GO:0004672|GO:0006468
Pvu8g1439 841 MobiDBLite consensus disorder prediction 439 460 - -
Pvu8g1439 841 Gene3D Transferase(Phosphotransferase) domain 1 195 420 - -
Pvu8g1439 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Pvu8g1439 841 SUPERFAMILY Protein kinase-like (PK-like) 494 803 IPR011009 -
Pvu8g1439 841 Gene3D Phosphorylase Kinase; domain 1 481 598 - -
Pvu8g1439 841 Gene3D Transferase(Phosphotransferase) domain 1 603 828 - -
Pvu8g1439 841 ProSiteProfiles Protein kinase domain profile. 117 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1439 841 Gene3D Phosphorylase Kinase; domain 1 89 194 - -
Pvu8g1439 841 SMART serkin_6 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1439 841 SUPERFAMILY Protein kinase-like (PK-like) 101 454 IPR011009 -
Pvu8g1439 841 Pfam Protein kinase domain 118 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1439 841 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 3 840 - -
Pvu8g1439 841 ProSitePatterns Protein kinases ATP-binding region signature. 123 152 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1439 Pvu-Chr8 23154444 23156969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1439 508 804 Receptor kinase-like Gene Family AT5G55830 36.877 3.40e-54 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu8g1439 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1439 - - vun:114184452 1561.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0453 10 6611080 6613931 Pvu8g1439 8 23154444 23156969 PCT