Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1432 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAATCCTTCGCCACCTCTGCAATACCAGAAACACCCTCACCACCGTCACCAATTTTATCCGCAAATCGAAATCGACATCACACCACCACAACAGCGCAGCGCAGTGCCGCAGGGAACCCCTCCGCCCTCCCTCTCCAAGCAGAAGCACCTCAACCCGCACGCCCAGCCGCCTCTCTTCAAGTCGCACAACGCCGCCTTCTTCTCTGTAACGGTCGCCGCCAAGAGCGCCGCGTTCCGCGCGCTGCGTCGCGTGAGGCGGCAGCGCGCGTTGCTCCTACTCGCGGTGCCGCTGCTCTACCTCTACTTCCTCGTCTCGCGGTCCTTCCTCCTCGACCTCCTCTCCGCGATCGCCTTCTCCGCCGCGCTTGTGTTCTCGCTCAACCTCGCGTTTCCGCTGCCGCTCCGCTCGATTCGGCTCAAGTCACCGTCCGCGGTGGTCGCGCGCCCCGCGTCGCCGCTGCCGGTGTTCTGGACGATTGGGTCGCGGCCCAAGTCGGAGAAGCGCGTGGCGTCGGGGTGCTGGGTGCAGGTCTTCGGAAACGGCGACGTTTACGAGGGGGAGTTTCATCGAGGGAAGTGTTCCGGGAGCGGGGTGTATTATTATAGTAGGAGTGGGAGGTACGAAGGGGATTGGGTGGATGGAAAATACGATGGCTATGGGGTGGAGACTTGGGCGCGTGGGAGTCGGTACCGAGGGTGTTACCGGCAGGGGTTGAGACACGGGTTTGGGGTGTATAGGTTTTACACCGGGGATGTGTACGCCGGCGAGTGGTCTAACGGACAGAGTCACGGGTGTGGGGTTCATACGTGCGAGGATGGGAGTAGGTACGTTGGAGAGTTCAAGTGGGGTGTCAAGCATGGCCTTGGTCATTATCATTTCAGAAATGGTGATACATATGTGGGTGAATACTTTGCGGACAAGATGCATGGTTTTGGGATATATCATTTTGCAAATGGCCATCGATATGAAGGAGCCTGGCATGAAGGTAGAAGGCAGGGACTTGGCATGTATACATTTAGAAATGGTGAAACCCAATCTGCTCACTGGCAAAATGGATTCCTTGACATTCCGAGCACTCAAAGCACTACTTATCCAGTTTCTCCTGTTGGTGTCTCTCATTCCAAAGTGCTCAATGCAGTGCAGGAAGCAAGACGAGCAGCAGAGAAAGCATATGAAGTGGCTAAGGTAGATGAAGGGGTGAACAGAGCTGTAGCAGCTTCTAATAGAGCAGCCAATGCAGCCAGAGTAGCTGCTGTGAAAGCTGCACAAAAGCAGATGCATGTTAAAAATGAAAGCTTCGCAATTCCTGTTATGTAA 1380 0.5522 MHQKKSEVQIGKESVGVSSDFNPSPPLQYQKHPHHRHQFYPQIEIDITPPQQRSAVPQGTPPPSLSKQKHLNPHAQPPLFKSHNAAFFSVTVAAKSAAFRALRRVRRQRALLLLAVPLLYLYFLVSRSFLLDLLSAIAFSAALVFSLNLAFPLPLRSIRLKSPSAVVARPASPLPVFWTIGSRPKSEKRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYVGEYFADKMHGFGIYHFANGHRYEGAWHEGRRQGLGMYTFRNGETQSAHWQNGFLDIPSTQSTTYPVSPVGVSHSKVLNAVQEARRAAEKAYEVAKVDEGVNRAVAASNRAANAARVAAVKAAQKQMHVKNESFAIPVM* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1432 459 MobiDBLite consensus disorder prediction 51 75 - -
Pvu8g1432 459 MobiDBLite consensus disorder prediction 51 71 - -
Pvu8g1432 459 Pfam MORN repeat 205 223 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 320 342 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 251 273 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 343 364 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 274 296 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 228 250 IPR003409 -
Pvu8g1432 459 Pfam MORN repeat 297 319 IPR003409 -
Pvu8g1432 459 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 72 451 - -
Pvu8g1432 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 246 373 - -
Pvu8g1432 459 Coils Coil 398 418 - -
Pvu8g1432 459 MobiDBLite consensus disorder prediction 1 33 - -
Pvu8g1432 459 SMART morn 226 247 IPR003409 -
Pvu8g1432 459 SMART morn 249 270 IPR003409 -
Pvu8g1432 459 SMART morn 203 224 IPR003409 -
Pvu8g1432 459 SMART morn 295 316 IPR003409 -
Pvu8g1432 459 SMART morn 318 339 IPR003409 -
Pvu8g1432 459 SMART morn 272 293 IPR003409 -
Pvu8g1432 459 SMART morn 341 362 IPR003409 -
Pvu8g1432 459 MobiDBLite consensus disorder prediction 12 26 - -
Pvu8g1432 459 Gene3D - 280 325 - -
Pvu8g1432 459 Gene3D - 326 390 - -
Pvu8g1432 459 Gene3D - 187 234 - -
Pvu8g1432 459 Gene3D - 235 279 - -
Pvu8g1432 459 PANTHER - 72 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1432 Pvu-Chr8 22860647 22868459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1432 197 376 Acyl Lipid Metabolism Gene Families AT1G60890 36.111 3.18e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1432 - - gmx:102667330 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1432 8 22860647 22868459 Pvu8g1432 8 22860647 22868459 ECH
Pvu8g1432 8 22860647 22868459 Pvu10g0757 10 21305619 21309475 PCT
Pvu10g0457 10 6641085 6647335 Pvu8g1432 8 22860647 22868459 PCT