Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1427 ATGGATTTTGTGGTGGTGGATTCGGACAAGGCAAATGAAGCCGAGTGTAGCTGTCTAGAAGAGAGTACAAGTATATATGAAGGAGTTGAAATTCAAGAGCCATATGTGGGCATGGAATTTGATTCTGAAGTAGCTGCTCGGAAATTTTATATTGATTACGCCAGACGGGTAGGATTTGTTGTACGCATAATGCAAAGGCGGCGTTCTGGAATTGATGGGAGGACTCTTGCTCGTCGGCTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGGGCATTGGGACCAGAGAAAAAACCAAGACCTAGTGCTCGTGAAGGTTGCAAGGCAACTATCTTGGTAAAGTTGGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACGGCTAATGGGTTTGGTACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTATGTGCTGCATATCGAGAAAAACTGCTGAGCTTTATAAACAATGTTGAGGAGGAGACAGAGGAACTGTCCACAAAAATTCAACTCGTTATTGAGAATGTAAGGAGAGCCGAGTCTGAAATGAAAAAATGTTCACAGAACAGAAAGCCTTGGTGCTTAACCTGA 660 0.4182 MDFVVVDSDKANEAECSCLEESTSIYEGVEIQEPYVGMEFDSEVAARKFYIDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFGTVGDKDKKISELTMELERQDQLCAAYREKLLSFINNVEEETEELSTKIQLVIENVRRAESEMKKCSQNRKPWCLT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1427 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 212 - -
Pvu8g1427 219 MobiDBLite consensus disorder prediction 85 106 - -
Pvu8g1427 219 Coils Coil 178 212 - -
Pvu8g1427 219 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Pvu8g1427 219 Coils Coil 153 173 - -
Pvu8g1427 219 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 13 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1427 Pvu-Chr8 22572895 22580400 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu8g1427 FAR1 1.2e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1427 - - vun:114183030 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1427 8 22572895 22580400 Pvu10g0341 10 4785760 4788667 PCT