Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1392 ATGTCCAGCTGTGAGAGCGACAGCAGCAGCGACAACGGAGAGCGGGGGCGGCGAAGGGAGACCCTGGACTTCCAGAACCTGAAGGTGGTGTCGGCGGTGGGACGCGGCGCGAAGGGCGTGGTGTTCCTGGCGCGGGTGGAGGGTGAAGGGAGCGGGGAGTGGATAGCGCTGAAGGTGGTGTCGAGGGAGCTGCTGAGGGTGAAGAACAGGAACGGGGGAAGGTGCAAGAGGGTGTCGTTCGAGAGGCACATACTCCGTCGTCTGCATCACCCGCTATTGCCCAGATTCCGAGGCGCTTTCGACACCGACCAACTCACCGGTTTCGCAATCGATTATTGCCACGGCGGAAACCTCCATTCGCTCCGGATGAAGCAATCGGAGAAGTGTTTCTCCGAAGAAACCGTAAGGTTTTATGCAGTAGAATTGGTTCTAGTATTGGAGTATTTGCACAAGTTTGGAGTAGTGTATAGGGATTTAAAGCCAGAGAATATCATGATCCAAGAATCAGGTCACATAATGTTAGTGGATTTTGATCTTTCCAAGAAGTTAAATATTAGGTCAACCGAGTCGAGTTGCAACTCATCACCGGGTTCTGGTTCTGAGTCGTCGAGGGAGAAGGATCGGAGGAAGCGGCGATTATCACGATTCAACTGTTACTGTCATTCAGGGATATCCTTGTACGAGTCAGATATGTCGAACCAACTCAGCAGCATCCCAACGCGTCGAAGCATGTCGGACTCGGTGGAGAAGTCCAACTCCTTTGTGGGAACGGAAGATTACGTGGCACCGGAGGTCATCTCCGGAGAAGGACACGACTTCGCCGTTGATTGGTGGTCATTAGGCGTTGTTATGTACGAGATGATTTACGGAGCGACGCCGTTTAAGGGTGCGAATAGGAAAGAAACGTTTCATCGTATCATAACGAAGGAGGCCGATTTATCAGGTGCAACAACGCCTTTGAGGGACTTGATTCAAAGCTTGCTTCACAAGGATCCTAACCGTAGGATCCAGGTAAATGAGATCAAGAACCACCATTTCTTTAAAGGCGTGATGTGGGACACAATCTTGGAAATTTCACGTCCACCTCATATTCCTCAAAATGAGATAAAGGATTCAGTAGGGTTTTCTCAAAAGGATGTAGAATCATTTGTTCATGGAATCTTTTTCCCCAAGAGTAAAGAGGAACCAAAAAACAATGAAAACCAAACCCCAAAGGAGGAAACTAATAAAAATGCCTGGGTTGACAAGTTAAATCAAAATTCTGCCAAAGATGAAAACTTTTTAATTTTTTGA 1293 0.4834 MSSCESDSSSDNGERGRRRETLDFQNLKVVSAVGRGAKGVVFLARVEGEGSGEWIALKVVSRELLRVKNRNGGRCKRVSFERHILRRLHHPLLPRFRGAFDTDQLTGFAIDYCHGGNLHSLRMKQSEKCFSEETVRFYAVELVLVLEYLHKFGVVYRDLKPENIMIQESGHIMLVDFDLSKKLNIRSTESSCNSSPGSGSESSREKDRRKRRLSRFNCYCHSGISLYESDMSNQLSSIPTRRSMSDSVEKSNSFVGTEDYVAPEVISGEGHDFAVDWWSLGVVMYEMIYGATPFKGANRKETFHRIITKEADLSGATTPLRDLIQSLLHKDPNRRIQVNEIKNHHFFKGVMWDTILEISRPPHIPQNEIKDSVGFSQKDVESFVHGIFFPKSKEEPKNNENQTPKEETNKNAWVDKLNQNSAKDENFLIF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1392 430 Gene3D Transferase(Phosphotransferase) domain 1 117 192 - -
Pvu8g1392 430 Pfam Protein kinase domain 29 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1392 430 Pfam Protein kinase domain 249 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1392 430 MobiDBLite consensus disorder prediction 391 417 - -
Pvu8g1392 430 MobiDBLite consensus disorder prediction 391 412 - -
Pvu8g1392 430 SUPERFAMILY Protein kinase-like (PK-like) 25 378 IPR011009 -
Pvu8g1392 430 SMART serkin_6 27 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1392 430 ProSiteProfiles AGC-kinase C-terminal domain profile. 348 430 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu8g1392 430 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 2 407 - -
Pvu8g1392 430 MobiDBLite consensus disorder prediction 187 209 - -
Pvu8g1392 430 ProSiteProfiles Protein kinase domain profile. 27 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1392 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pvu8g1392 430 Gene3D Transferase(Phosphotransferase) domain 1 248 366 - -
Pvu8g1392 430 Gene3D Phosphorylase Kinase; domain 1 27 116 - -
Pvu8g1392 430 PANTHER FLIPPASE KINASE 1-RELATED 2 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1392 Pvu-Chr8 21399088 21400804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1392 17 430 AGC Kinase Gene Family AT3G25250 51.515 5.05e-141 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu8g1392 Pkinase 9.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1392 K20714 - gmx:100813693 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1392 8 21399088 21400804 Pvu8g1392 8 21399088 21400804 ECH
Pvu8g1392 8 21399088 21400804 Pvu10g0316 10 4404523 4406792 PCT