Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1362 ATGTCTGTGGTAGTGAGATGCGTTCTCTTGTTGTCCATGCTTACGTTGACATGGGCAAATAATCATGTGTTTATTACGAACAATCTGGAAGGAAGGGAAGATCTAAACATTCACTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCATATTAATCAATACTTCAGAATTACTTTTCAGCCTAACTTTTTCTTTGGAACACTCTTCTTTTGTTCATTTCAATGGGGAAATGGTCCTTTGTTCCACTTTGACGTATACGACCAAAATACAGATTACTACAAGTGTGATGCTGATTGTAAATGGTATGTTCATAAAAATGGACCATGTAGGAATGAACTACAAGATAACTCGTCATATGTTCACAAATGTTATCCATGGAAACAGTAA 393 0.3639 MSVVVRCVLLLSMLTLTWANNHVFITNNLEGREDLNIHCKSKDDDLGPHVLHINQYFRITFQPNFFFGTLFFCSFQWGNGPLFHFDVYDQNTDYYKCDADCKWYVHKNGPCRNELQDNSSYVHKCYPWKQ* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1362 130 PANTHER - 13 118 IPR010264 -
Pvu8g1362 130 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 13 118 - -
Pvu8g1362 130 Pfam Plant self-incompatibility protein S1 22 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1362 Pvu-Chr8 20485214 20485606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1362 23 128 Carbohydrate Esterase AT3G16970 41.284 8.59e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1362 - - pvu:PHAVU_008G064000g 177.178