Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1360 AGGGAAGATCTAAACATTCACTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCATATTAATCAATACTTCAGAATTACTTTTCAGCCTAACTTTTTCTTTGGAACACTCTTCTTTTGTTCATTTCAATGGGGAAATGGTCCTTTGTTCCACTTTGACGTATACGACCAAAATACAGATTACTACAAGTGTGATGCTGATTGTAAATGGTATGTTCATAAAAATGGACCATGTAGGAATGAACTACAAGATAACTCATCATATGTTCACAAATGTTATCCATGGAAACAGTAA 300 0.3467 REDLNIHCKSKDDDLGPHVLHINQYFRITFQPNFFFGTLFFCSFQWGNGPLFHFDVYDQNTDYYKCDADCKWYVHKNGPCRNELQDNSSYVHKCYPWKQ* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1360 99 PANTHER - 3 87 IPR010264 -
Pvu8g1360 99 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 3 87 - -
Pvu8g1360 99 Pfam Plant self-incompatibility protein S1 2 97 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1360 Pvu-Chr8 20456514 20456813 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1360 4 97 Carbohydrate Esterase AT3G16970 41.237 1.52e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1360 - - pvu:PHAVU_008G064000g 157.918