Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1345 ATGGGTAAGATTGAACTAGTAGAGAAAATTGTAATTGTTCCTGAGCAACCTACACCACGCAAGAGAATGTTCTTGTCAAACATTGATTTGTCTCTTGTTGTTTACCAAGACTCTGCCTCTTTTTTTGACCCTCCAAGCACCCAAATGAGTTTCAGTGAGATTTGTAACAAATTATACACCGCACTTAGTAAAATGCTTATGCAATATGACTTTATGGCTGGTAGACTGGTGCCAAGTTTGGAAGAGACTCAGAGATTTGAAATTGACTGCAATGGTGCTGGCATTGTGGTTGCAGCTGCAAGAACTGACAGAAAATTGAGTGATTTTGGTGTGATTTCTGCACCTAATCCAGAGTTGAAGGAATTAGTTGTGTTCCTGCATGAAGGGTGTGACCAAGAAACTGATCTCAAAGAAAAACCCCTTGCATCCTTACAGCTGACTCAATTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAATCACTGCACACTGGACGGTTTTGCAATAAGAGATTTTGAGGTAAACTTAGGTGCATTAACACGTGGTGAAGACCTCATCATAGTACCTAATGCAGATAGAACACTGCTGAGAGCTCGAAATCCTCCAACTGTTACTCATCCACATTTTGAGTATTCAAAAGCTACTGTGACACACAACTTGTTCACCCTCCGAGGAAAAAGTGATACCAATGTCATACAATCTGTGCTAGAAAACCAGATTCATGTTCTTCATTTGCCACCACAAAGCATTGCTAGCTTCAAAAAGAAAGCCCTGGAGGATAAGACCTTAAAGAGCATAACCACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAATAGGGATGTCAGAGGAAAAAGTGTCCACAATGTTGTTTCCAGTGGATGTGAGGAAAAGGGTTGTTCCTGAACTCCCAAATAGCTTTGCAGGAAATGCACTGGTGCCTGGTTTTGCAAGAGCAACTGTGAAGGAGTTGAAGGAGCTAGAAGATGGTTGTCACATAAGGAAAGTGCAAGAAGGGGTGGAAAGGTTGGATGATGAGTACATAAAGTCAGGGATAGATTGGTTAGAAGTGAACAAAGGGGCACCTTGTATGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGATTAGGGTTAGAGGAGCAACTTTTTGCATGGGGTAGACTAAAGTCTGCTACTCCACTTGAAGTTAAACCTGGTTTGGTCATGCTATTGCCAGGGCCACAAGATCAAGGGGGCATTAACATAAGCCTTGATTTACCTCAGGATCAAATGCAAGAGTTTAGTAGGATAATGCTACAAATTTAG 1323 0.418 MGKIELVEKIVIVPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPSTQMSFSEICNKLYTALSKMLMQYDFMAGRLVPSLEETQRFEIDCNGAGIVVAAARTDRKLSDFGVISAPNPELKELVVFLHEGCDQETDLKEKPLASLQLTQFGCGSLALASHYNHCTLDGFAIRDFEVNLGALTRGEDLIIVPNADRTLLRARNPPTVTHPHFEYSKATVTHNLFTLRGKSDTNVIQSVLENQIHVLHLPPQSIASFKKKALEDKTLKSITTFQVVAAKIWKARSIAIGMSEEKVSTMLFPVDVRKRVVPELPNSFAGNALVPGFARATVKELKELEDGCHIRKVQEGVERLDDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKSATPLEVKPGLVMLLPGPQDQGGINISLDLPQDQMQEFSRIMLQI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1345 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 438 - -
Pvu8g1345 440 Pfam Transferase family 3 434 - -
Pvu8g1345 440 Gene3D - 2 214 IPR023213 -
Pvu8g1345 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 438 - -
Pvu8g1345 440 Gene3D - 236 440 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1345 Pvu-Chr8 20089563 20091716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1345 3 440 Monolignol Biosynthesis Gene Families AT5G48930 28.348 8.52e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1345 K15400 K13065 gmx:100801822 761.14