Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g1312 | ATGTGCAGATCTTGTTCTGTAATCGGAATAATGGGTTTCATCAGCCATGCAAACTTGTTCTTCGTTTTGTTCATGCTGTGTTTTTATGTGTTGGACATTGGTTTTGCCACCGACACCATCACATCATCACAATCCCTTAGGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTTACTTTGGGGTTCTTCGTCCCTCCAAACTCCACAAACCACTACGTCGGAATTTGGTGGAAATCTCAATCCACAGTCGTATGGGTTGCTAACAGAGATCAACCACTGAATGATTCTTCAGGAGCTGTTACCTTTTCTGAAGATGGCAATCTTGTGGTGGTGAATGGAGAGAATCAAGTTATTTGGTCAACGTTTGTGTCAAACACATCATCCAATACAAGTGCCCAGCTTTCAGACGTGGGGAAGCTTGAACTCACGGAAACCACAACGGGGAAGAGCTTATGGGATAGTTTTCAGCAACCTTCAGATACATTTTTGCCCCAAATGAAAATTTCAAGCAATAAAACAGGTAGTGGAGGAAAACTTACATCATGGAAGAGTCCTTCTAATCCCTCTGCTGGGAGCTTCTCTGTGGGTGTTGCTGAACGCGTAAAAATCGTTGAAGCGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCCTGGAGTTCTGGGGTCTTTACAGGGATAGAGCAGATGAATAGTGCATATCTAAATAGTTTTTCTGTTCTAGATGGGGTACTCTATTATAACCTAGACGGTTTATCTGCATTTTTAATCTACGTTCTGAATTCGCAAGGTCAATTTCAAGAAAAACGTTGGGATGAAGAGGAGAAAGAAGTACAAGTTACGTGGACAAGTAAACAATCGGATTGTGATGTTTATGGTGTATGCGGGTCGTTCGCAATCTGTGATGCACATAGCCAAGGAACAAATGGCTCATCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAAGGAGCAAAGAGGAATGGGATGCACAAAACTGGACCAGTGGATGCTTTTGGAGCACACCCTTGCAGTGTGAAAGAGCCAAAGATCAAAACACAAGTATAGATACAAATGAAGATAAATTTTTGGAACTGCAAAAGGTGAAAATTCCAGATTTGTCTGAATGGTCTAACGATGATCCAGACACATGCAGAAGCCGATGCTTGGAAAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGTATGTCTTGGACTGAGAATCTACTAGACATCCAACAACTCTCGGATCGAGGACTTCCTCTATATGTTCGTGTGGCCTACTCTACTGAACTTGAACATGATGAAGGGAAAAAGACAACAATTATCATTATAGTAACAGTGATAATAGGAATTATGATCACTGTCACTTGTGCATGTGTAATGTGGAGGAGGAATTCCTGTCACCCAGTTAAAATATGGTACTCAATCAAGTCAGCAATGAAAAGGGACAAGAAAGATTTCATACGTTTCAACAATGTTAAACCACTAGAACAAACAGGCCACAAAGTATTTGAAGAACTAAAGGAGCTGCTCCTGTTTGATTTCGAAAGGCTTGCAACTGCCACAAACAACTTCCACGAGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTGCAAGATGGACAAGAAATAGCTGTTAAAAGACTTTCTAGATCCTCTGGACAAGGTCTAGAAGAATTTATGAACGAAGTAGTCGTGATTTCCAAGCTTCAGCACCGCAATCTTGTAAGACTTCTTGGCTGCTGTACTGAAGGTGACGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGTCTGGATGTGTTTATTTTTGATCCAACAAAACATAAACTCCTAGATTGGAGGAGGCGCTGCTCTATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGACTCTAGACTAAAAATTATACACAGAGATTTGAAGGCAAGTAATATCTTGTTAGATGAAGAACTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATATTTGGAGGAACTGAAGATCACGCCAATACGAATAGGATTGTTGGAACATATGGCTACATGTCCCCTGAATATGCAATGCAAGGACTGGTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGATGATGAGCGTTCTCTTACCCTTATAGGATTTGTCTGGACACAGTGGAACGAAGGCAATATATTATCTTTATTAGACTCAGAAATATACGATCCTAATGATCATGAAGATATTTTAAGGGTCATTCACATAGGACTTTTATGTGTACAAGAACTTGCTTTAGAAAGACCCACAATGGCTACAGTAATTTCTATGCTTAATAGTGATGTTGCCTTTCTTCCTCCCCCAAGCCAACCTGCATTCGTCCGGGTGCAAAATGTGTTGAATTCGGAGTCGTCTAAAGAGAGTCAAAGAGTTTGTTCCGTGAATATTATTAGTATTACAGATATCCATGGTAGATAG | 2553 | 0.4062 | MCRSCSVIGIMGFISHANLFFVLFMLCFYVLDIGFATDTITSSQSLRDPETLSSKDGNFTLGFFVPPNSTNHYVGIWWKSQSTVVWVANRDQPLNDSSGAVTFSEDGNLVVVNGENQVIWSTFVSNTSSNTSAQLSDVGKLELTETTTGKSLWDSFQQPSDTFLPQMKISSNKTGSGGKLTSWKSPSNPSAGSFSVGVAERVKIVEAFIWNETRPYWRSGPWSSGVFTGIEQMNSAYLNSFSVLDGVLYYNLDGLSAFLIYVLNSQGQFQEKRWDEEEKEVQVTWTSKQSDCDVYGVCGSFAICDAHSQGTNGSSICSCLKGFEPRSKEEWDAQNWTSGCFWSTPLQCERAKDQNTSIDTNEDKFLELQKVKIPDLSEWSNDDPDTCRSRCLENCSCVAYSHDDGIGCMSWTENLLDIQQLSDRGLPLYVRVAYSTELEHDEGKKTTIIIIVTVIIGIMITVTCACVMWRRNSCHPVKIWYSIKSAMKRDKKDFIRFNNVKPLEQTGHKVFEELKELLLFDFERLATATNNFHESNKLGQGGFGPVYKGKLQDGQEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCTEGDEKMLLYEYMPNKSLDVFIFDPTKHKLLDWRRRCSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDHANTNRIVGTYGYMSPEYAMQGLVSEKSDVFSFGVLLLEIVSGRRNSSFYDDERSLTLIGFVWTQWNEGNILSLLDSEIYDPNDHEDILRVIHIGLLCVQELALERPTMATVISMLNSDVAFLPPPSQPAFVRVQNVLNSESSKESQRVCSVNIISITDIHGR* | 851 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g1312 | 850 | CDD | STKc_IRAK | 538 | 804 | - | - | |
Pvu8g1312 | 850 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 | 22 | 840 | - | - | |
Pvu8g1312 | 850 | Gene3D | Transferase(Phosphotransferase) domain 1 | 608 | 808 | - | - | |
Pvu8g1312 | 850 | ProSiteProfiles | Protein kinase domain profile. | 532 | 783 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g1312 | 850 | SMART | ntp_6 | 360 | 432 | IPR003609 | - | |
Pvu8g1312 | 850 | Pfam | Protein tyrosine and serine/threonine kinase | 535 | 803 | IPR001245 | GO:0004672|GO:0006468 | |
Pvu8g1312 | 850 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 189 | IPR036426 | - | |
Pvu8g1312 | 850 | SMART | blect_4 | 43 | 159 | IPR001480 | - | |
Pvu8g1312 | 850 | PIRSF | SRK | 10 | 850 | IPR024171 | GO:0004674 | |
Pvu8g1312 | 850 | Pfam | Domain of unknown function (DUF3403) | 808 | 850 | IPR021820 | GO:0004674 | |
Pvu8g1312 | 850 | SMART | serkin_6 | 532 | 809 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g1312 | 850 | Gene3D | Phosphorylase Kinase; domain 1 | 496 | 607 | - | - | |
Pvu8g1312 | 850 | PANTHER | - | 22 | 840 | - | - | |
Pvu8g1312 | 850 | Pfam | D-mannose binding lectin | 83 | 184 | IPR001480 | - | |
Pvu8g1312 | 850 | Gene3D | - | 33 | 157 | IPR036426 | - | |
Pvu8g1312 | 850 | ProSiteProfiles | Bulb-type lectin domain profile. | 37 | 156 | IPR001480 | - | |
Pvu8g1312 | 850 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 653 | 665 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu8g1312 | 850 | CDD | B_lectin | 43 | 159 | IPR001480 | - | |
Pvu8g1312 | 850 | CDD | PAN_AP_plant | 344 | 433 | - | - | |
Pvu8g1312 | 850 | ProSiteProfiles | PAN/Apple domain profile. | 348 | 433 | IPR003609 | - | |
Pvu8g1312 | 850 | Pfam | S-locus glycoprotein domain | 217 | 326 | IPR000858 | GO:0048544 | |
Pvu8g1312 | 850 | SUPERFAMILY | Protein kinase-like (PK-like) | 516 | 830 | IPR011009 | - | |
Pvu8g1312 | 850 | Pfam | PAN-like domain | 360 | 418 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g1312 | Pvu-Chr8 | 18866426 | 18869705 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g1312 | 454 | 818 | Receptor kinase-like Gene Family | AT4G23230 | 51.507 | 1.64e-123 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pvu8g1312 | PK_Tyr_Ser-Thr | 1.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g1312 | - | - | gmx:100779455 | 1196.42 |