Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1312 ATGTGCAGATCTTGTTCTGTAATCGGAATAATGGGTTTCATCAGCCATGCAAACTTGTTCTTCGTTTTGTTCATGCTGTGTTTTTATGTGTTGGACATTGGTTTTGCCACCGACACCATCACATCATCACAATCCCTTAGGGACCCTGAAACTCTAAGCTCCAAAGATGGTAACTTTACTTTGGGGTTCTTCGTCCCTCCAAACTCCACAAACCACTACGTCGGAATTTGGTGGAAATCTCAATCCACAGTCGTATGGGTTGCTAACAGAGATCAACCACTGAATGATTCTTCAGGAGCTGTTACCTTTTCTGAAGATGGCAATCTTGTGGTGGTGAATGGAGAGAATCAAGTTATTTGGTCAACGTTTGTGTCAAACACATCATCCAATACAAGTGCCCAGCTTTCAGACGTGGGGAAGCTTGAACTCACGGAAACCACAACGGGGAAGAGCTTATGGGATAGTTTTCAGCAACCTTCAGATACATTTTTGCCCCAAATGAAAATTTCAAGCAATAAAACAGGTAGTGGAGGAAAACTTACATCATGGAAGAGTCCTTCTAATCCCTCTGCTGGGAGCTTCTCTGTGGGTGTTGCTGAACGCGTAAAAATCGTTGAAGCGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCCTGGAGTTCTGGGGTCTTTACAGGGATAGAGCAGATGAATAGTGCATATCTAAATAGTTTTTCTGTTCTAGATGGGGTACTCTATTATAACCTAGACGGTTTATCTGCATTTTTAATCTACGTTCTGAATTCGCAAGGTCAATTTCAAGAAAAACGTTGGGATGAAGAGGAGAAAGAAGTACAAGTTACGTGGACAAGTAAACAATCGGATTGTGATGTTTATGGTGTATGCGGGTCGTTCGCAATCTGTGATGCACATAGCCAAGGAACAAATGGCTCATCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAAGGAGCAAAGAGGAATGGGATGCACAAAACTGGACCAGTGGATGCTTTTGGAGCACACCCTTGCAGTGTGAAAGAGCCAAAGATCAAAACACAAGTATAGATACAAATGAAGATAAATTTTTGGAACTGCAAAAGGTGAAAATTCCAGATTTGTCTGAATGGTCTAACGATGATCCAGACACATGCAGAAGCCGATGCTTGGAAAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGTATGTCTTGGACTGAGAATCTACTAGACATCCAACAACTCTCGGATCGAGGACTTCCTCTATATGTTCGTGTGGCCTACTCTACTGAACTTGAACATGATGAAGGGAAAAAGACAACAATTATCATTATAGTAACAGTGATAATAGGAATTATGATCACTGTCACTTGTGCATGTGTAATGTGGAGGAGGAATTCCTGTCACCCAGTTAAAATATGGTACTCAATCAAGTCAGCAATGAAAAGGGACAAGAAAGATTTCATACGTTTCAACAATGTTAAACCACTAGAACAAACAGGCCACAAAGTATTTGAAGAACTAAAGGAGCTGCTCCTGTTTGATTTCGAAAGGCTTGCAACTGCCACAAACAACTTCCACGAGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTGCAAGATGGACAAGAAATAGCTGTTAAAAGACTTTCTAGATCCTCTGGACAAGGTCTAGAAGAATTTATGAACGAAGTAGTCGTGATTTCCAAGCTTCAGCACCGCAATCTTGTAAGACTTCTTGGCTGCTGTACTGAAGGTGACGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGTCTGGATGTGTTTATTTTTGATCCAACAAAACATAAACTCCTAGATTGGAGGAGGCGCTGCTCTATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGACTCTAGACTAAAAATTATACACAGAGATTTGAAGGCAAGTAATATCTTGTTAGATGAAGAACTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATATTTGGAGGAACTGAAGATCACGCCAATACGAATAGGATTGTTGGAACATATGGCTACATGTCCCCTGAATATGCAATGCAAGGACTGGTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGATGATGAGCGTTCTCTTACCCTTATAGGATTTGTCTGGACACAGTGGAACGAAGGCAATATATTATCTTTATTAGACTCAGAAATATACGATCCTAATGATCATGAAGATATTTTAAGGGTCATTCACATAGGACTTTTATGTGTACAAGAACTTGCTTTAGAAAGACCCACAATGGCTACAGTAATTTCTATGCTTAATAGTGATGTTGCCTTTCTTCCTCCCCCAAGCCAACCTGCATTCGTCCGGGTGCAAAATGTGTTGAATTCGGAGTCGTCTAAAGAGAGTCAAAGAGTTTGTTCCGTGAATATTATTAGTATTACAGATATCCATGGTAGATAG 2553 0.4062 MCRSCSVIGIMGFISHANLFFVLFMLCFYVLDIGFATDTITSSQSLRDPETLSSKDGNFTLGFFVPPNSTNHYVGIWWKSQSTVVWVANRDQPLNDSSGAVTFSEDGNLVVVNGENQVIWSTFVSNTSSNTSAQLSDVGKLELTETTTGKSLWDSFQQPSDTFLPQMKISSNKTGSGGKLTSWKSPSNPSAGSFSVGVAERVKIVEAFIWNETRPYWRSGPWSSGVFTGIEQMNSAYLNSFSVLDGVLYYNLDGLSAFLIYVLNSQGQFQEKRWDEEEKEVQVTWTSKQSDCDVYGVCGSFAICDAHSQGTNGSSICSCLKGFEPRSKEEWDAQNWTSGCFWSTPLQCERAKDQNTSIDTNEDKFLELQKVKIPDLSEWSNDDPDTCRSRCLENCSCVAYSHDDGIGCMSWTENLLDIQQLSDRGLPLYVRVAYSTELEHDEGKKTTIIIIVTVIIGIMITVTCACVMWRRNSCHPVKIWYSIKSAMKRDKKDFIRFNNVKPLEQTGHKVFEELKELLLFDFERLATATNNFHESNKLGQGGFGPVYKGKLQDGQEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCTEGDEKMLLYEYMPNKSLDVFIFDPTKHKLLDWRRRCSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDHANTNRIVGTYGYMSPEYAMQGLVSEKSDVFSFGVLLLEIVSGRRNSSFYDDERSLTLIGFVWTQWNEGNILSLLDSEIYDPNDHEDILRVIHIGLLCVQELALERPTMATVISMLNSDVAFLPPPSQPAFVRVQNVLNSESSKESQRVCSVNIISITDIHGR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1312 850 CDD STKc_IRAK 538 804 - -
Pvu8g1312 850 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 22 840 - -
Pvu8g1312 850 Gene3D Transferase(Phosphotransferase) domain 1 608 808 - -
Pvu8g1312 850 ProSiteProfiles Protein kinase domain profile. 532 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1312 850 SMART ntp_6 360 432 IPR003609 -
Pvu8g1312 850 Pfam Protein tyrosine and serine/threonine kinase 535 803 IPR001245 GO:0004672|GO:0006468
Pvu8g1312 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 189 IPR036426 -
Pvu8g1312 850 SMART blect_4 43 159 IPR001480 -
Pvu8g1312 850 PIRSF SRK 10 850 IPR024171 GO:0004674
Pvu8g1312 850 Pfam Domain of unknown function (DUF3403) 808 850 IPR021820 GO:0004674
Pvu8g1312 850 SMART serkin_6 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1312 850 Gene3D Phosphorylase Kinase; domain 1 496 607 - -
Pvu8g1312 850 PANTHER - 22 840 - -
Pvu8g1312 850 Pfam D-mannose binding lectin 83 184 IPR001480 -
Pvu8g1312 850 Gene3D - 33 157 IPR036426 -
Pvu8g1312 850 ProSiteProfiles Bulb-type lectin domain profile. 37 156 IPR001480 -
Pvu8g1312 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Pvu8g1312 850 CDD B_lectin 43 159 IPR001480 -
Pvu8g1312 850 CDD PAN_AP_plant 344 433 - -
Pvu8g1312 850 ProSiteProfiles PAN/Apple domain profile. 348 433 IPR003609 -
Pvu8g1312 850 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Pvu8g1312 850 SUPERFAMILY Protein kinase-like (PK-like) 516 830 IPR011009 -
Pvu8g1312 850 Pfam PAN-like domain 360 418 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1312 Pvu-Chr8 18866426 18869705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1312 454 818 Receptor kinase-like Gene Family AT4G23230 51.507 1.64e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1312 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1312 - - gmx:100779455 1196.42