Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1311 GATTTTGTCATTGAAGCTACACTTCCTCTATTTTTCCTCTTCTCTATTATTATTCAATTAAATTTAAATGTTGTTACTGCCACAGACACCATCAACTCTTCTCAGTTCATCAAGGACAATGAAACGATAACCTCCACTGGTGGCAACTTCACCTTGGGCTTCTTCACCCCTCAAAATTCTACCAATCGTTATGTGGGAATTTGGTGGAAAACCAAATTCCCTATCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTCACCATATCTGAAGATGGCAATCTTGTGGTGTTGAATGGTCAGAATCAAGTAATTTGGTCAACAAATGTGTCCAATAATGGATCCAACTATACTTCCAAACTCTTAGATTCTGGGAACCTTGTGCTACAGGAAAGCTCATCAGGAAGAACTATATGGGAGAGTTTCCAGCATCCTTCAAATACAATGTTACCCAATATGAAGATTTCAACTAACAAAGCAACTGGTGCAAAGGTAAAACAAACATCATGGAAAAGCCCTTCTGATCCATCCACTGGTAGCTTTTCTCTAAGTGTTGAACGCCTTAGTGTACCTGAAGTGTTCATCTGGAAAGAAACTCGCCCCTTCTGGCGCACTGGTCCATGGAATGAGAGATGGTGGAACGGAGAGAGGAAAGAATGGGTAGTCACATGGAATAGTCATCAATTTGAATGTGATGTTTATGGTGTATGTGGACCTTTTGCAGTTTGTAATTCTCAAAGCTCACCAACATGCAGCTGTTTGAAAGGGTTTGAGCCAAGAAACAAAGAGGAATGGAATAGACAAAACTGGACTAGTGGATGTTTTAGGAGAACACCTCTGAAGTGTGAAAGAACCAGCAATCAAAACAAAAGTGCAGATTATACAGAAGATGGATTTTTGGAGCTGAAGATGATCAAAGTTCCAGATTTTTCAGATGGGTCACCCCTCAGACTTCAGCCAGACATGTGCAGAAGCCGATGTTTGGAGAATTGTTCATGCATTGCATACTCATATGATGCTGATATTGGTTATAAAGAGAGAAACAGGACAATCATCATTATTGTTACAGTTACAATAGGAGCTACCTTAATTGTCATTTGTGCATATATCATGTGGAGAAGGATTTCTACCCACCAAGGTGCAGCCCCTGCAGAATATATAAATGACTATGTATTTGGTGATCTGTCACATGAAGTCAAACTCCAGGAGCTATTAACATTTAATTTAGAAAAGCTTGTAACCGCCACAAATGAATTTCACCCATCGAACAAACTAGGACAAGGTGGTTTCGGTCCAGTATACAAGGGGCAATTGCACGATGGCAGGGAAATTGCAGTTAAAAGACTTTCTAGAACATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAAACTTCTTGGCTGTTGTATTGAAGGGGAGGAAAAGATGTTGATTTATGAGTACATGCCAAATAAGAGTTTGGACACATATATCTTTGATCCGTCGAAAGATAAAGTTCTTCATTGGAGAAAACGCTTTAGCATAATAGAAGGAGTGGCTCGAGGAATGCTTTATCTTCACAGAGATTCCAGGCTAAAAATCATCCACAGGGACTTGAAAGCAAGTAATATCTTGCTAGATGTGGAGCTAAATCCAAAGATATCTGACTTTGGTATGGCTAGAATCTTTGGTGGGAATGAGGATGAAGCAAATACTAAAAGAATTGTTGGAACTTAG 1770 0.396 DFVIEATLPLFFLFSIIIQLNLNVVTATDTINSSQFIKDNETITSTGGNFTLGFFTPQNSTNRYVGIWWKTKFPIIWVANRNQPLNDSSGVVTISEDGNLVVLNGQNQVIWSTNVSNNGSNYTSKLLDSGNLVLQESSSGRTIWESFQHPSNTMLPNMKISTNKATGAKVKQTSWKSPSDPSTGSFSLSVERLSVPEVFIWKETRPFWRTGPWNERWWNGERKEWVVTWNSHQFECDVYGVCGPFAVCNSQSSPTCSCLKGFEPRNKEEWNRQNWTSGCFRRTPLKCERTSNQNKSADYTEDGFLELKMIKVPDFSDGSPLRLQPDMCRSRCLENCSCIAYSYDADIGYKERNRTIIIIVTVTIGATLIVICAYIMWRRISTHQGAAPAEYINDYVFGDLSHEVKLQELLTFNLEKLVTATNEFHPSNKLGQGGFGPVYKGQLHDGREIAVKRLSRTSGQGLEEFMNEVVVISKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDTYIFDPSKDKVLHWRKRFSIIEGVARGMLYLHRDSRLKIIHRDLKASNILLDVELNPKISDFGMARIFGGNEDEANTKRIVGT* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1311 589 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 216 587 - -
Pvu8g1311 589 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 15 219 - -
Pvu8g1311 589 Pfam S-locus glycoprotein domain 210 265 IPR000858 GO:0048544
Pvu8g1311 589 Pfam Protein tyrosine and serine/threonine kinase 427 575 IPR001245 GO:0004672|GO:0006468
Pvu8g1311 589 CDD EGF_CA 235 266 - -
Pvu8g1311 589 Gene3D - 23 148 IPR036426 -
Pvu8g1311 589 Pfam PAN-like domain 300 346 IPR003609 -
Pvu8g1311 589 Pfam D-mannose binding lectin 75 176 IPR001480 -
Pvu8g1311 589 CDD PAN_AP_plant 283 348 - -
Pvu8g1311 589 Gene3D Transferase(Phosphotransferase) domain 1 500 589 - -
Pvu8g1311 589 SMART serkin_6 424 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1311 589 SMART blect_4 34 150 IPR001480 -
Pvu8g1311 589 ProSiteProfiles Protein kinase domain profile. 424 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1311 589 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Pvu8g1311 589 PANTHER - 15 219 - -
Pvu8g1311 589 PANTHER - 216 587 - -
Pvu8g1311 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Pvu8g1311 589 SUPERFAMILY Protein kinase-like (PK-like) 405 589 IPR011009 -
Pvu8g1311 589 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 181 IPR036426 -
Pvu8g1311 589 Gene3D Phosphorylase Kinase; domain 1 397 499 - -
Pvu8g1311 589 CDD B_lectin 34 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1311 Pvu-Chr8 18820709 18825761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1311 350 589 Receptor kinase-like Gene Family AT4G05200 55.144 1.32e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1311 PK_Tyr_Ser-Thr 4.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1311 - - pvu:PHAVU_008G127000g 1209.9