Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1309 ATGGCACAAACCGTTGACTTCAAAGGGACACTGTCAAATCTTACAGTGGCCATTTGGTTCGTAGTAATGGATTTCAGAAGCCGTGCAAACAACATGTTCGTTGTTTTGTTCATACTGTGTTGTTGTGCTTTGGATTTTGGTACTGCCACAGACACCATCAACTCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGGTGGCAACTTCACCTTGGGCTTCTTCACCCCTCAAAATTCTACCAATCGTTATGTGGGAATTTGGTGGAAAAGCAAATTCCCTGTCACATGGGTGGCTAACAGAAACCAACCACTGAGTGATTCTTCTGGTGTTGTCACCATATCTGAAGATGGGAATCTTGTGGTGTTGAATGGTCAGAATCAAGTGATTTGGTCAACAAATGTGTCAACGACATCATCCAATACAAGTGCCCAGCTTTTAGATTCTGGTAAGCTAGTCCTCACTGAAACCACAAGGGGAATCATCTTGTGGGATAGTTTTGAGCACCCTTCAAATACGTTATTGCCCGGTATGAAAACTTCAACCAATGTAAGAACAGGTACGAAAGTAGAAATTACATCATGGAAAAGCCCTTCTAATCCCTCCGTTGGGAGCTTTTCTTCCAGGGTTCTTCGACGCATAAATATAATTGAAGTGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAATGGTGGGATCTTTACAGGGATATCCATGTCATCGTTTCTTTATTCTTTCAAAGCTGGGGATGATGAGGAAGGAAATACATATTTCTATTACACAGTAGCAAGTCCGCAACAAATTTTTATGTATATGTTGAATTCGCGAGGCCAATATAACCAAATATCGTGGAATGATAAGAAGAAGGAGATGGAAATTACATGGACTAGTCAAGAATCAGATTGTGATGTTTATGGAATATGTGGGTCATTCGCTATTTGTAATGCAGAAAGCTCACCAATATGCAATTGTTTGAAAGGGTTTGAGCCGAGGAAGAAAGAAGAATGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGCACACCTTTGCAGTGTGAAAGGGTCAGAGATCAAAACGTAAGTGCAAAGGAAGATGGCTTTTCGAAACTGCAAATGGTTAAAGTTCCCGATTTTCCAGAAGGGATTATTGTTGACACTGAATGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCTTTTGATGTTGGAATCGGTTGCATGTCTTGGACTGGGAATCTTATAGACATACAACAAATGGCAGAGGGAGGACTTGATTTATATGTTCGTGTAGCTGACTCTGATCTTGAACATGATAAAGGGACAAACACAGCAATGATCACTGGAATTACAGTGTCAGTAGTAACAGTCATCATAGTTACTTCTGCATATGTCATGTGGAGGACTTCTAATCACCCAGCCAAAATATGGCATTCAATCAAATCAGCAAGAAAAAGGAACATCAAAGCTTTTCAATTATTGAACAAAAAAGGTGAAACACCAGAACATCCAAGCCACCAAGTAATAGAAGAACTGTCACAAGTTAAACTCCAGGAGCTGTTACTATTTGATTTTGAAAGGCTTGCAACAGCCACAAACAACTTCCACCTGTCCAACAAACTTGGGCAGGGTGGTTTTGGACCTGTGTACAAGGGGAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGAACATCTGGGCAAGGTCAAGAAGAATTCATGAACGAAGTAGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGTTGTATTGGAGGTGACGAAAAGATGTTGATATATGAGTACTTGCCAAATAAAAGCTTGGATGTGTTAATCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGGGATTCCAGACTAAGAATCATACACAGAGATTTGAAGACAAGTAATATATTGCTTGATGAAGAACTAAATCCAAAAATATCAGACTTTGGTATGGCAAGAATATTTGGAGGGAGTGAAGATGAGGCCAACACTAACAGAATTGTTGGAACATATGGCTATATGTCCCCCGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGCACTAGAGATTGTAAGTGGAAGAAGAAATTCAAGCTTTCATGATGATGAGCATGTTCTTAGCCTCTTGGGATTTGCCTGGATACAGTGGAGGGAAGGAAATATATCTTCTTTAATAGATCCAGAAGTGTATGATCCTAGTCATAATAAAGATATTTTAAGGTTCATTCACATAGCACTTCTATGTGTGCAAGAACTTGCTATAGACCGACCCACCATGGCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCATTTCTTCCACCTCCAAATCAACCTGCATTCATCCTGAGGCATAATTTGCTGAATTCAGTGTCATCTAAAGGAAGTCATAGATTTTCTTCCACCAATACTGTTAGCATTACAAGTATCAGTGGAAGATAG 2592 0.3985 MAQTVDFKGTLSNLTVAIWFVVMDFRSRANNMFVVLFILCCCALDFGTATDTINSSQFIKDNETITSTGGNFTLGFFTPQNSTNRYVGIWWKSKFPVTWVANRNQPLSDSSGVVTISEDGNLVVLNGQNQVIWSTNVSTTSSNTSAQLLDSGKLVLTETTRGIILWDSFEHPSNTLLPGMKTSTNVRTGTKVEITSWKSPSNPSVGSFSSRVLRRINIIEVFIWNETRPYWRSGPWNGGIFTGISMSSFLYSFKAGDDEEGNTYFYYTVASPQQIFMYMLNSRGQYNQISWNDKKKEMEITWTSQESDCDVYGICGSFAICNAESSPICNCLKGFEPRKKEEWNRQNWTSGCVRSTPLQCERVRDQNVSAKEDGFSKLQMVKVPDFPEGIIVDTECRSQCLENCSCVAYSFDVGIGCMSWTGNLIDIQQMAEGGLDLYVRVADSDLEHDKGTNTAMITGITVSVVTVIIVTSAYVMWRTSNHPAKIWHSIKSARKRNIKAFQLLNKKGETPEHPSHQVIEELSQVKLQELLLFDFERLATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRTSGQGQEEFMNEVVVISKLQHRNLVRLFGCCIGGDEKMLIYEYLPNKSLDVLIFDPSKSKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISDFGMARIFGGSEDEANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLALEIVSGRRNSSFHDDEHVLSLLGFAWIQWREGNISSLIDPEVYDPSHNKDILRFIHIALLCVQELAIDRPTMAAVISMLNSEVAFLPPPNQPAFILRHNLLNSVSSKGSHRFSSTNTVSITSISGR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1309 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Pvu8g1309 863 SMART serkin_6 545 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1309 863 CDD STKc_IRAK 551 817 - -
Pvu8g1309 863 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 34 843 - -
Pvu8g1309 863 PIRSF SRK 23 863 IPR024171 GO:0004674
Pvu8g1309 863 Pfam Protein tyrosine and serine/threonine kinase 546 813 IPR001245 GO:0004672|GO:0006468
Pvu8g1309 863 Pfam D-mannose binding lectin 97 198 IPR001480 -
Pvu8g1309 863 Gene3D Transferase(Phosphotransferase) domain 1 621 821 - -
Pvu8g1309 863 Gene3D Phosphorylase Kinase; domain 1 508 620 - -
Pvu8g1309 863 SUPERFAMILY Protein kinase-like (PK-like) 530 853 IPR011009 -
Pvu8g1309 863 SMART ntp_6 370 441 IPR003609 -
Pvu8g1309 863 ProSiteProfiles Bulb-type lectin domain profile. 50 169 IPR001480 -
Pvu8g1309 863 Gene3D - 46 169 IPR036426 -
Pvu8g1309 863 CDD PAN_AP_plant 356 442 - -
Pvu8g1309 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 203 IPR036426 -
Pvu8g1309 863 SMART blect_4 56 172 IPR001480 -
Pvu8g1309 863 Pfam PAN-like domain 370 427 IPR003609 -
Pvu8g1309 863 PANTHER - 34 843 - -
Pvu8g1309 863 Pfam S-locus glycoprotein domain 231 338 IPR000858 GO:0048544
Pvu8g1309 863 CDD B_lectin 56 172 IPR001480 -
Pvu8g1309 863 ProSiteProfiles Protein kinase domain profile. 545 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1309 863 ProSiteProfiles PAN/Apple domain profile. 360 442 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1309 Pvu-Chr8 18758875 18762251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1309 519 833 Receptor kinase-like Gene Family AT4G11530 57.278 3.49e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1309 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1309 - - var:108327403 1459.51