Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1290 ATGGCTTTGTCGATCACACTCTTTCTTCTAGCATTAATGCATTTGCAAGGTTCATCTTCTTCATCATCGTTGAGAATGGGTTCTTCCCTCTCTGTGGAAAATCCACAAGATACTCTCATCTCACCAAATGCTATCTTCTCTGCTGGTTTTGTTTCCATTGGTGAGAACGCATATTCATTTGCAATATGGTTCACGGAACCTCATTTTCACAGCCCTAACACTGTCACATGGATGGCCAACCGTGACCAACCTGTGAATGGAAAACGCTCCAAACTTTCCCTCACAGACGATGGCAACATACTCTTGATTGATGCTTCTCTTAACACTGTTTGGTCTTCAAACACCGATTCATTAGACCCAGTAGAGTTGCATCTCAAGGATGATGGAAATCTTGTGTTACACCAGCTTCAAGGAACGGTTCTATGGCAAAGTTTTGATTTTCCCACCGATACTCTTGTTCCTGGTCAACCTCTTACCAGATACACACAACTTGTGTCTTCAAGAAGCGAGAGTAACCATTCCTCAGGTTTCTATACGTTTTTATTCGATGATAGCAACGTTCTTGGTCTTCATTATGATGGTCCTGATGTTTCAAGCTCCTACTGGCCACAACCTTGGTTGATAAGTTGGGATGCTGGAAGGACTAATTTCAACAGTAGTAGAATTGGCGTGATGAACTCTCTTGGGATTTTCAATTCAACTGATAATTTCACTTTCGTGACATCTGATTATGGCACAGTGCTGCAGAGAAGGTTGAAAGTGGATTGTGATGGGAATGTTCGAGTGTATAGTCGAAAGAATGTTTTGCAGAAGTGGTATGTTTCATGGCAAGCAATTTCTAGTGGTTGCATACCTCATGGGATTTGTGGACCCAACAGCTTCTGCGTTTATGCTCATGCGAGTGGAAGAAAATGTTTGTGTCTTCCGGGGCATAGATTGAAGAACCACAGTGATTGGTCTCAAGGGTGTGAACCCTTGTTTCAGCTTACTTGCCATGTGAATGAGTCTATGTTCTTGGAGATTCCAAATGTTGAGTTCTATGGCTATGACAATCATTATGTAGAAGTTAGTAACTACAGTGCCTGCCAGAATTTATGCTTGCAAGACTGCAATTGTAAGGGGTTTCAGCACTCCTATAGTGATGATAAACGCTTTTATAGGTGCTATACAAAAACACAATTGCTCAATGGAAAACATTCACCGGTATTCCAAGGAACAACATACTTGAGATTGCCCAAAAGCAATAGCTTCTCTCACAAACAATATGCCAGTGAACCTTTATATGATCATGTTTGTTCTGTTCAACTTCAACGAGCTTATGTCAAACCACATGCAAACCGTTTTGTAAAGATTTTCCTGTGGTTTTCTACAGCCCTTGGAGCTTCTGAAGTGATTTGCGCTTTTGCGATTTGGCGTCTACTAGTTTGGACCAGACAAAAGTCTGACGTTGATCGAGAGGGCTACCATCTTACAGAAACAGGATTCAGAAAGTTTAGCTTATCTGAGCTGAAAAAGGCTACAAAGGGTTTCAGTGAAGAGATAGGAAGAGGTGGGGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAGAGACATGCAGCAATTAAGAGACTTTATAATGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAAGTAGGCATCATTGGAAAGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAACATAGGTTGTTGGTGTATGAGTATATGGAGAACGGTTCTTTAGCAGAAAATCTCTCATCCAACACTCTTGATTGGAGGAAGAGATACAACATAGCTCTTGGAACAGCAAGAGTTTTAGCATATCTGCATGAAGAATGTTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAATATACTTCTAGATTCTAACTATGAGCCAAAGTTAGCAGACTTTGGCTTGTCTAAGCTCCTGAACAGAAATAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGCTATATGGCACCTGAGTGGGTTTTTAACTTGCCTATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGGAAAAGCACAACAAGAAGTATCCATAATGAAGAAAGATATGATGGGAGGGTGGTGGAATGGGTGAGAGAGAAAAGAGGGAACAGTAGCTCATGTTGGTTGGAGGAAATAATTGAAGCTGATATTGGAGATGATTATGATCATAGGAAGATGGAAATTTTGAGTAAAGTGGCTTTGAAGTGTGTGATGGAAGACAGAGATTTAAGGCCCACCATGAGCCAAGTAGTTGAGATGCTTCAGTGA 2346 0.4113 MALSITLFLLALMHLQGSSSSSSLRMGSSLSVENPQDTLISPNAIFSAGFVSIGENAYSFAIWFTEPHFHSPNTVTWMANRDQPVNGKRSKLSLTDDGNILLIDASLNTVWSSNTDSLDPVELHLKDDGNLVLHQLQGTVLWQSFDFPTDTLVPGQPLTRYTQLVSSRSESNHSSGFYTFLFDDSNVLGLHYDGPDVSSSYWPQPWLISWDAGRTNFNSSRIGVMNSLGIFNSTDNFTFVTSDYGTVLQRRLKVDCDGNVRVYSRKNVLQKWYVSWQAISSGCIPHGICGPNSFCVYAHASGRKCLCLPGHRLKNHSDWSQGCEPLFQLTCHVNESMFLEIPNVEFYGYDNHYVEVSNYSACQNLCLQDCNCKGFQHSYSDDKRFYRCYTKTQLLNGKHSPVFQGTTYLRLPKSNSFSHKQYASEPLYDHVCSVQLQRAYVKPHANRFVKIFLWFSTALGASEVICAFAIWRLLVWTRQKSDVDREGYHLTETGFRKFSLSELKKATKGFSEEIGRGGGGVVYKGILSDQRHAAIKRLYNAKQGEGEFLAEVGIIGKLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWRKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMVTGKSTTRSIHNEERYDGRVVEWVREKRGNSSSCWLEEIIEADIGDDYDHRKMEILSKVALKCVMEDRDLRPTMSQVVEMLQ* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1290 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Pvu8g1290 781 ProSiteProfiles Bulb-type lectin domain profile. 15 146 IPR001480 -
Pvu8g1290 781 SMART blect_4 29 148 IPR001480 -
Pvu8g1290 781 ProSiteProfiles Protein kinase domain profile. 508 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1290 781 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Pvu8g1290 781 Gene3D Transferase(Phosphotransferase) domain 1 583 781 - -
Pvu8g1290 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pvu8g1290 781 CDD STKc_IRAK 514 781 - -
Pvu8g1290 781 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Pvu8g1290 781 Pfam S-locus glycoprotein domain 234 314 IPR000858 GO:0048544
Pvu8g1290 781 Pfam D-mannose binding lectin 74 160 IPR001480 -
Pvu8g1290 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 781 - -
Pvu8g1290 781 Gene3D Hepatocyte Growth Factor 338 420 - -
Pvu8g1290 781 Gene3D - 18 146 IPR036426 -
Pvu8g1290 781 ProSiteProfiles PAN/Apple domain profile. 331 415 IPR003609 -
Pvu8g1290 781 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 781 - -
Pvu8g1290 781 CDD PAN_AP_plant 327 412 - -
Pvu8g1290 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 164 IPR036426 -
Pvu8g1290 781 SMART serkin_6 508 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1290 781 CDD B_lectin 38 148 IPR001480 -
Pvu8g1290 781 Pfam Protein kinase domain 511 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1290 781 Pfam PAN-like domain 331 393 IPR003609 -
Pvu8g1290 781 SUPERFAMILY Protein kinase-like (PK-like) 487 780 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1290 Pvu-Chr8 18089228 18091573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1290 498 780 Trihelix Transcription Factor Family AT5G38560 40.690 5.19e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu8g1290 Pkinase 9.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1290 - - gmx:100783758 1222.61