Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1289 ATGACTTTGTTAGCCACGTTCTTTCTTCTAGCATCGTTATTGTCCTTCCAACCTTCACGTTCTTCATCATCATTGAGAATGGGTTCTTCCCTCTCTGTGGAAAATCCACAACATATTCTCATCTCACCAAATGCTATCTTCTCTGCTGGCTTCTTAGCCATTGGCCATAACGCATATTCATTTGCAATATGGTTCACGGAGCCTCATTTTCACAGCCCTAACACTGTCACATGGATGGCAAACCGTGACCAACCTGTGAACGGAAAACGCTCCAAACTTTCCCTAACACACGATGGCAACATACTCTTGATTGATGCTTCTCTTAACACTGCTTGGTCTTCAAACACCGATTCGTTAGACCCAGTAGAGTTGCATCTCAAAGATGATGGCAATCTAGTGTTGCGCAAGCTTCAAGGAACCGTTCTGTGGCAAAGTTTCGATTTTCCAACCGACACGCTCGTTCCTGGCCAGCCTCTTACCAGATACACACAACTGGTGTCTTCAAGAAGCCACACTAACCATTCATCTGGTTTCTACAAGCTGTTTTTCGGCGATGATAACATTCTTCGTCTTGTATACGATGGCCCTGATGTTTCCAGCAATTACTGGCCAAGTCCCTGGCGAGTAAGTTGGGATGTTGGTAGAACTTTATTCAATAGCTCTAGAATTGCTGTGTTGAATTCTTTTGGGGTCTTTCATTCCTCAGATAACTTCACTTCTAAAACATCAGATTATGGCACCGTACTTCAGAGAAGGTTGAAATTGGATTCTGATGGTAATTTCCGAGTGTATAGTCGAAATAGTGTGTCAGAGAAATGGTATGTTTCGTGGCAAGCCATTACTAATGGTTGCTTGATTCATGGGGTTTGTGGAGCCAACAGCACGTGTGGTTATGATGGTAAGAGTGGGAAAAAGTGTAAGTGTCTTCCAGGGTACAGATTGAACAACCAGAGTGATTGGTCTCATGGGTGCAAACCCATGTTTGATCTCACCTGCAATAGGAATGAGTCTACCTTCTTGGAGATGCGGGGTGTTGAATTTTACGGGTATGATAATTATTATATACAATTTAGTAACTTCAGTGCTTGTGAAGATTTGTGCTTGCAAAATTGCAGTTGTCAGGGGTTTCAGTACTCCTATAACGATAAAAAGGGTATCACCTTCAAGTGTTATACCAAAACGCAATTGCTCAATGGAAGGCGTTCACCCAGATTCCCAGGAGCAACATACTTGAGAGTGTCCAAAAGTTATAGCTTCTCTGGCGAAGAATCTGCTAATGACACTGCACATGATCATCGAGTTTGTTCAGTTCAACTTCAAAGAGATTACATAAAAACATCTGGAAACCGAATTGTGAGTGTTTTTATGTGGTTTGCTACCGCACTTGGAGCTTTTGAAATGGTTTGCGTTTCTGTGATTTGGTGCTTCCTAATTAGGACCAGCCAAAAGTCCGATGCAGATCAACAGGCCTACCATCTTACAGCAACGGGATTCAGAAAATTTAGCTACTCCGAGCTGAAAAAGGCTACAAAGGGATTCAGTGAAGAGATTGGAAGAGGTGGGGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAGAGACATGCAGCAATTAAGAGACTTTATAATGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAAGTAGGCATCATTGGAAAGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAACATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCTACTAACAAACTTGATTGGAGTAAGAAATATAACATTGCAATTGGAACAGCAAGAGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTACACTGTGATATAAAGCCACAAAATATACTTCTAGATTCCAATTATGAGCCAAAGTTAGCAGACTTTGGCTTGTCTAAGCTCCTGAACAGAAATAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGCTACATGGCACCTGAGTGGGTTCTGAACTTGCCTATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGGAGAAGCACAGCAAGTGTGCAAGAAATTAATGGTGAAGAGACATATGATGGGAGGCTAGTGGCATGGGTGAGAGAAAAAAGAAGCAACACCAACTCATATTGGGTGGAACAAATAATTGAACCTTCTATTGGACCTGATTATGATAGAAGTAAGATGGAAATGTTGACTACAGTGGCTTTGAACTGTGTAAATGAAGACAGAGATTCAAGACCAAGCATGAGCCAAGTAGTTGAGATGCTTCAAGGTCATGGAAGTGATCCTTATTCATGA 2385 0.4172 MTLLATFFLLASLLSFQPSRSSSSLRMGSSLSVENPQHILISPNAIFSAGFLAIGHNAYSFAIWFTEPHFHSPNTVTWMANRDQPVNGKRSKLSLTHDGNILLIDASLNTAWSSNTDSLDPVELHLKDDGNLVLRKLQGTVLWQSFDFPTDTLVPGQPLTRYTQLVSSRSHTNHSSGFYKLFFGDDNILRLVYDGPDVSSNYWPSPWRVSWDVGRTLFNSSRIAVLNSFGVFHSSDNFTSKTSDYGTVLQRRLKLDSDGNFRVYSRNSVSEKWYVSWQAITNGCLIHGVCGANSTCGYDGKSGKKCKCLPGYRLNNQSDWSHGCKPMFDLTCNRNESTFLEMRGVEFYGYDNYYIQFSNFSACEDLCLQNCSCQGFQYSYNDKKGITFKCYTKTQLLNGRRSPRFPGATYLRVSKSYSFSGEESANDTAHDHRVCSVQLQRDYIKTSGNRIVSVFMWFATALGAFEMVCVSVIWCFLIRTSQKSDADQQAYHLTATGFRKFSYSELKKATKGFSEEIGRGGGGVVYKGILSDQRHAAIKRLYNAKQGEGEFLAEVGIIGKLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSTNKLDWSKKYNIAIGTARVLAYLHEECLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMVTGRSTASVQEINGEETYDGRLVAWVREKRSNTNSYWVEQIIEPSIGPDYDRSKMEMLTTVALNCVNEDRDSRPSMSQVVEMLQGHGSDPYS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1289 794 CDD STKc_IRAK 517 787 - -
Pvu8g1289 794 SMART blect_4 30 149 IPR001480 -
Pvu8g1289 794 CDD B_lectin 40 149 IPR001480 -
Pvu8g1289 794 Pfam S-locus glycoprotein domain 247 314 IPR000858 GO:0048544
Pvu8g1289 794 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Pvu8g1289 794 Gene3D - 19 147 IPR036426 -
Pvu8g1289 794 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Pvu8g1289 794 SMART serkin_6 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1289 794 SUPERFAMILY Protein kinase-like (PK-like) 489 785 IPR011009 -
Pvu8g1289 794 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1289 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 791 - -
Pvu8g1289 794 Pfam PAN-like domain 332 395 IPR003609 -
Pvu8g1289 794 ProSiteProfiles Bulb-type lectin domain profile. 16 147 IPR001480 -
Pvu8g1289 794 Pfam Protein kinase domain 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1289 794 Gene3D Transferase(Phosphotransferase) domain 1 586 791 - -
Pvu8g1289 794 PIRSF SRK 1 793 IPR024171 GO:0004674
Pvu8g1289 794 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 6 791 - -
Pvu8g1289 794 Pfam D-mannose binding lectin 75 162 IPR001480 -
Pvu8g1289 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Pvu8g1289 794 Gene3D Phosphorylase Kinase; domain 1 476 585 - -
Pvu8g1289 794 CDD PAN_AP_plant 328 414 - -
Pvu8g1289 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 166 IPR036426 -
Pvu8g1289 794 Gene3D Hepatocyte Growth Factor 341 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1289 Pvu-Chr8 18063734 18066300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1289 501 785 Trihelix Transcription Factor Family AT5G38560 40.753 2.60e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu8g1289 Pkinase 4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1289 - - var:108322780 1393.64