Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1267 ATGGCACTAAATAAGACAGGAAGCATGTTAGGTACCAACACTGGTAAGGATCCTAGCGTGTTTCCTCAACATGCCCAACAAGATCTATCTGGTAGTGTTTCAAATACAGGGCGCCATGTGCAAAGTAATATCACTATGCAGGCAGGGGAAGAATTTTCTGGGAATGTTGGTCGTGATGGAATTGCTGCTGGAAGAGTTGTTGTTTCACGAGTTATACCTCGAAATCATGAGAATGTGTTTGGGTTAAATAGAGAGAATGGCAATGTGAGATATGAAGATCTTACTAATATTTTGGGGCTGAGGAGAATGAACTCTGAGAATTCTTCTGACATGTCTGACTTTGTATCTATAAAACAGTCAGTACAGGAGATGGAAAATGGAGCTGCTGAAAACATTTTTAACAAAATTCAAAAGGGTGATGGTATGATGAGGAAGGCTGTTCAAGAACCGGTGGGTGACCAGTCTGGTCTCGCATTTGTATCACCCCTTCATAGATATGAAGCTTCTCAGTCCAATGGATTTTCTGGTTCAGGAGTTATAGATGATTTTCTGTCTGGGAAAATGAAGTTTCTTTGCAGTTTTGGTGGAACAATATTACTACGACCAAGTGATGGGAAACTCAGATATGTAGGGGGAGAGACCCACATCGTATCTATTCCAAAGGATATTTCATGGCAAGAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATAAAGTACCAGCTTCCTGGAGAGGATCTCGATGCTCTAATATCCGTTTCCTCTGATGAAGATCTCCAAAATATGAAAGAGGAATACCATGGGCTTGAAAGACATGAACGTTCTCAAAAACTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCAACAGAGGTGAGTGCTGTTCAGCAGAGTGATCCTGATTACCAATATGTTGTTGCTGTAAATGGCATGGGAGACTCTACTAGAACAAACATTGGTGGGCAAAATTTGACAAATGAATCCAGTCAGTTGGGGACAGATTTGAACTTTACTCCAGTTGTCCCAAAAACAACAAATGCTTCTCCTTTGGAGATCAGGGATGGTATTAATGCTTTAAACCCAGACGGGATTTTGAATGATTCCCTGAATTTGCAAAGGCCCTTGTCAATTCCTCCCACTCCAATTCCAGTAACAGGTTCTAACACAGGTTATATACAATTACTCGGTGACCATTCATGTCAGGGAAGTATTGAGAGCAATGCATCATATGCTACTACTCATCTACATCCTGAGTACTCTAATATAAGCCCTGCTGGTTGCATATACCCTCAGCATGTGGCTGCTACTTTGTCAAGTGACACTTATCCTTATCAGCATGGTGATGTTGGTCAGCCCGAGAAGCTCAATGGAGGTCATTTAGACTACAATCCTAGCAAGAAATTAGTGACTCCTGTATATGTTAATCCCAGAGATGAAATTTTTGGTGGAAGGTTCTTGCAAAGGGAAAGGGTCTACTCTGAAATTCCTATTTCATACTTGGATGATGCAATCTGTCGACAGGGTGAATCTTACGGAATTACAGACTCCCCTCATGGGATGCACCATGCCTTTTCTGATCCACAGTTGCTAGATAGTGGAGCAAGATCTGCTTACTGCTCCCGAAATGGATATGGTCAATCTTTCTCCCTGAACCTTGAAAAGGATCAATTATCTTCATTGTTAATCCCAAGTGTATCGCAAGTGAACGCCATGGAGCATCAACATGATTCCATTGTCCATCATCCTCAAATACAAAGTACGACACCAAAAGTGGAGTCAACTGAGGCATACAAAAGGCAAGATTTGGCATCTTCTCCATACTATGAATCCATGGGAATGAATGATCTTATTGACATGGATAACATATTAACTGAAAAAAATAACTTAATTGCTCCAACTGATTTGAGTATACCCAGCTACGAAGCAAAGGATGTTCTGGAAAATTCTATGAAATTAGAAAGGATGAAGTTAATTGAAAAGAATAATTCTATTCACAAGGATAACAAGGTTCATCAGGGGGAATCAACTGTCATTGACAAGGGATTTGTGACTGAGTTGCATCTTTTGGACTCTTTCCCTGCTAATAACTTAAATGCTAATACTAATATGCAAAAGAATAGGGAGCTACCTTCTGAGGGTATTGTACCTGCTCCATCAGACACGATGGGTGTCTCCTTAATTAATATTGGGGAAAAGACCACATTTGATTCTTCGGCTGGTGAACAAGGGTTTGACTTTTCATTGCCCAGAAATTTTGACTTAAATGCTCCAATTTTAAATTCTGAAGTAGGCTCTTGTGAGAAAAGTTCTCGAGGAGACCATAGGTTCAACCTGTCCATTCACCCAGATTCTCTTAAAGCTGCACAAATTCATCTTTCGAACAATCAGATGCCTATAGATTTTCAAGAAAATCCTACAGTAGGCTCTGGAAATTTGTATCCTGCTGCATTTTGTCATGATCTTGGTCCAAGTCTAAACATGCCTATGAATGGCCTTGATAATTCAAGCAATATTATGCCATTTAAAAAGGCACCATCTTTTTTTGATGACTTCATTGTTGACAATGGTCAAATGGTGGATCAGTTTATCCCCAAACACCCTGCCTCTGGAATGTCAAATGTTGAAGATAAAATTTCAGAACAACCAAAAGTTTTAGAAGGCTGTACTGATGTGAATCAAGTGGAGTCGTTAACAGTAGCAAACATGACTCATGTTGTTCATTCATATAGTTCGGGTGATATTGGAAGTGCAGTTGTATCCCCATCTCATACAGAAGCTGGGAGCATCATCCCCGAGTCTGAACCTGAGGATTTTACTGAAGACAAAAATGAATTTCTTTCTGATGCAATGATGGCAGAAATGGAGGCTAGCATTTATGGTTTACAGATTATAAGGAATGCTGATCTTGAAGAACTTACAGAGTTAGGTTCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACTGATATTGCTATAAAGAGAATTAAAAAGAGTTGCTTTGCAGGAAGGTCTTCCGAACAAGAACGCTTGGCAAAAGATTTTTGGAGAGAGGCTCAGATCCTTTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGGAGGAACTTTAGCAACTGTAACAGAATACATGGTTAATGGTTCCCTTAGGCACGTCCTTGTAAAGAACAATAGATTACTTGATCGCCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATCTAAGGGACCCACAACGACCAATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGAGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTATTGAATGGGAATAGCAGTCGGGTTTCTGAGAAGGTTGACGTTTTTTCATTTGGCATCTCAATGTGGGAGTTATTAACAGGAGAAGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACTCTTAGACCTCCTGTGCCTGATCGATGCGATTCTGAATGGAGAAAGCTTATGGAAGAGTGTTGGTCACCTGAGCCCGAAAACCGGCCATCATTCACAGAGATAACCAGCAGGTTAAGATCTATGTCTGTAGTCCTTCAACCAAAAGGGAATGGTCAGGCATATCAGTTAAGACCCTCCTGA 3783 0.4036 MALNKTGSMLGTNTGKDPSVFPQHAQQDLSGSVSNTGRHVQSNITMQAGEEFSGNVGRDGIAAGRVVVSRVIPRNHENVFGLNRENGNVRYEDLTNILGLRRMNSENSSDMSDFVSIKQSVQEMENGAAENIFNKIQKGDGMMRKAVQEPVGDQSGLAFVSPLHRYEASQSNGFSGSGVIDDFLSGKMKFLCSFGGTILLRPSDGKLRYVGGETHIVSIPKDISWQELMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMKEEYHGLERHERSQKLRIFLVPLGESEETSTEVSAVQQSDPDYQYVVAVNGMGDSTRTNIGGQNLTNESSQLGTDLNFTPVVPKTTNASPLEIRDGINALNPDGILNDSLNLQRPLSIPPTPIPVTGSNTGYIQLLGDHSCQGSIESNASYATTHLHPEYSNISPAGCIYPQHVAATLSSDTYPYQHGDVGQPEKLNGGHLDYNPSKKLVTPVYVNPRDEIFGGRFLQRERVYSEIPISYLDDAICRQGESYGITDSPHGMHHAFSDPQLLDSGARSAYCSRNGYGQSFSLNLEKDQLSSLLIPSVSQVNAMEHQHDSIVHHPQIQSTTPKVESTEAYKRQDLASSPYYESMGMNDLIDMDNILTEKNNLIAPTDLSIPSYEAKDVLENSMKLERMKLIEKNNSIHKDNKVHQGESTVIDKGFVTELHLLDSFPANNLNANTNMQKNRELPSEGIVPAPSDTMGVSLINIGEKTTFDSSAGEQGFDFSLPRNFDLNAPILNSEVGSCEKSSRGDHRFNLSIHPDSLKAAQIHLSNNQMPIDFQENPTVGSGNLYPAAFCHDLGPSLNMPMNGLDNSSNIMPFKKAPSFFDDFIVDNGQMVDQFIPKHPASGMSNVEDKISEQPKVLEGCTDVNQVESLTVANMTHVVHSYSSGDIGSAVVSPSHTEAGSIIPESEPEDFTEDKNEFLSDAMMAEMEASIYGLQIIRNADLEELTELGSGTYGTVYHGKWRGTDIAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPDRCDSEWRKLMEECWSPEPENRPSFTEITSRLRSMSVVLQPKGNGQAYQLRPS* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1267 1260 Gene3D Transferase(Phosphotransferase) domain 1 1064 1254 - -
Pvu8g1267 1260 MobiDBLite consensus disorder prediction 1 37 - -
Pvu8g1267 1260 Gene3D - 206 288 - -
Pvu8g1267 1260 Pfam Protein tyrosine and serine/threonine kinase 979 1239 IPR001245 GO:0004672|GO:0006468
Pvu8g1267 1260 Pfam PB1 domain 204 288 IPR000270 GO:0005515
Pvu8g1267 1260 SMART serkin_6 976 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1267 1260 CDD PB1_UP2 191 286 - -
Pvu8g1267 1260 PANTHER SERINE-THREONINE PROTEIN KINASE 112 1254 - -
Pvu8g1267 1260 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 112 1254 - -
Pvu8g1267 1260 PRINTS Tyrosine kinase catalytic domain signature 1058 1071 IPR001245 GO:0004672|GO:0006468
Pvu8g1267 1260 PRINTS Tyrosine kinase catalytic domain signature 1095 1113 IPR001245 GO:0004672|GO:0006468
Pvu8g1267 1260 PRINTS Tyrosine kinase catalytic domain signature 1166 1188 IPR001245 GO:0004672|GO:0006468
Pvu8g1267 1260 PRINTS Tyrosine kinase catalytic domain signature 1210 1232 IPR001245 GO:0004672|GO:0006468
Pvu8g1267 1260 ProSiteProfiles Protein kinase domain profile. 976 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1267 1260 SUPERFAMILY CAD & PB1 domains 203 292 - -
Pvu8g1267 1260 CDD STKc_MAP3K-like 982 1239 - -
Pvu8g1267 1260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1101 1113 IPR008271 GO:0004672|GO:0006468
Pvu8g1267 1260 Gene3D Phosphorylase Kinase; domain 1 969 1063 - -
Pvu8g1267 1260 ProSitePatterns Protein kinases ATP-binding region signature. 982 1007 IPR017441 GO:0005524
Pvu8g1267 1260 SUPERFAMILY Protein kinase-like (PK-like) 963 1238 IPR011009 -
Pvu8g1267 1260 SMART PB1_new 202 289 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1267 Pvu-Chr8 16695537 16713707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1267 184 458 MAP Kinase Kinase Kinase AT1G16270 40.411 3.83e-43 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu8g1267 PK_Tyr_Ser-Thr 1.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1267 - - pvu:PHAVU_008G122700g 2534.6