Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1246 ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGATAACCTCGAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAACTAGCAGGAACTCATCAGCCTCTGTATCCGTCACTTCTCGGAGTGAAGGTGAAATCTTGCAATCGTCCAATTTGAAAAGCTTCAGCTATAGTGAGCTAAGGGTGGCCACAAGAAATTTCCGCCCAGATAGTGTCTTGGGGGAGGGTGGTTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAACATTCACTTACTGCTACCAAACCGGGAATAGGCATGATTGTTGCTGTGAAGAGGCTTAACCAAGAGGGTTTCCAGGGTCACAGAGAATGGCTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAACCTCGTCAAGTTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTTTGGTTTATGAATTCATGCCTAAGGGTAGCATGGAAAATCATCTTTTTAGAAGAGGTTCTTACTTTCAGCCTTTCTCGTGGAGTTTGCGAATGAAAATAGCTCTTGGGGCTGCGAAGGGCCTTGCTTTTCTTCACAGTACAGAGCCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTTGATACACATTATAACGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGCCATGTCTCTACTAGGGTCATGGGAACCCGAGGATATGCGGCTCCAGAGTATTTAGCAACAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCTATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGACTGGGCCAAGCCTTACCTGTCTAATAAACGAAGAGTTTTCCGTGTAATGGATCCACGTTTGGAAGGTCAATATTCTCATAGTCGAGCTCAAGCAGCAGCTGCACTTGCTATGCAATGTCTTTCTGTAGAGTCCAAGTGCAGGCCAAATATGGAGGAGGTGGTAAAAGCATTGGAGCAGGTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATCTACGCAATTCCGGCCAAGGCCGTTCCAACGGCATCCATGGTGGTGCAGATGTGCCTAGAATGCCTTCTACTTATCCCAGACCTACAGCTTCTCTCCTTGGCGGTTGA 1233 0.459 MGACWSNRIKAVSPSNTGITSRSVSRSGHDISSTSRNSSASVSVTSRSEGEILQSSNLKSFSYSELRVATRNFRPDSVLGEGGFGSVFKGWIDEHSLTATKPGIGMIVAVKRLNQEGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTHYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVDWAKPYLSNKRRVFRVMDPRLEGQYSHSRAQAAAALAMQCLSVESKCRPNMEEVVKALEQVQESKDMQRKGADHKHHHLRNSGQGRSNGIHGGADVPRMPSTYPRPTASLLGG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1246 410 PANTHER KINASE 1B 22 393 - -
Pvu8g1246 410 Gene3D Transferase(Phosphotransferase) domain 1 159 383 - -
Pvu8g1246 410 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pvu8g1246 410 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pvu8g1246 410 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1246 410 PANTHER OS01G0588500 PROTEIN-RELATED 22 393 - -
Pvu8g1246 410 CDD STKc_IRAK 79 357 - -
Pvu8g1246 410 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1246 410 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Pvu8g1246 410 MobiDBLite consensus disorder prediction 360 410 - -
Pvu8g1246 410 MobiDBLite consensus disorder prediction 13 44 - -
Pvu8g1246 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1246 Pvu-Chr8 15614701 15618501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1246 27 355 Glycoside Hydrolase AT3G07070 48.949 4.02e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu8g1246 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1246 - - gmx:100793817 737.643