Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1236 ATGCAAAGATTAGTCCTCATGGATCCACGTATTTGTGGGTTTAGTGGTCCCTCTAATGAAGTCCGGTTAGGAAATCAGAGATTTGAAAATGATTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAATCCAATCTAGTGCCTAATAAGACGCCTTCTGCATCCTCTGTTTTAAGTCACGAGGAACCTTCTCCGGAAGAATGTGAATTTTCTGATGCAATTTTGAGCTACATCAGTCAGATCCTTATGGAGGAAGACATGGAAGATAAGACATGCATGTTGCATGACTCTTTAGATCTTCAAATTGCCGAGAGATCATTCTATGAGGTGATAGGAGAAAAGTACCCTTCTTCGCTTTTAGAAAATCCAAGTCCTGTTGATCCAGATGGTGGGGTTGGGGATCGTAATTTCTCTGAAAATTATGGTACTTGTTCTTACAATGATGGTGATCTCAGTAGTATTTTAACAAATTTTCGTCAAAATTTGGGAGAATTTCCTAACCATAATTTACGAGGCAATAGCATTTCACAGTCATCTTGTAGCTCTTCAAATAGTGTCATAAGTAGTGTGGAAGGACCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGAGTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAAGCTAGCAAGTTTCTTCCAAGTGGAATTGGGCTCTTTGCTAATTTGGGTGCGGCTAATTTTTCAAAACTAGAGCCTAAAATGGGGAGTGCTGAATTGTCAGTTAAGGTGGAGAAGGATGTGGGGGATTCTTTTCTTGCTGGGTCCAAAGTAAGGAAACATCATCTTGGGGAAGAGGCGGATGATGAAGAAAATAGAAGCAGCAAGCAAGCTGCAATTTTCTCCGAACCTACATTGCCATCAACTTCTATGGATGCAATCCTGCTTCATAGTTTAGGGGATGGCAGGAAGCTTTTTATGGCCCGTCGTGAGGCTTTGCAAACTAAGAGTGATAAGACAGCACTGTCAAATGGTAAATCAAAGGCTTCCAACAGTGGCAAGGGACGTAGTAAGAAACAAAGTGGGAAAAAGGAAGTGGTTGATTTGAGAACACTTTTGGTTCTTTGTGCACAAGCTGTTGCAGCAGATGACTATAATGGCGCACATGAGTTTCTAAAGCGGATCAGGAAACACTCAAACCCTTTTGGGGATGGAAATCAGAGGTTGGCTCACATCTTTGCTGATGGCCTTGAAGCGCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTTTATCTTGCTGCTTGCCCTTTTAGGAAGATGGCTAGTTTTGTCTCTAATATCACTATAAGGACATCTTCCTCAAATTCAGCAAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTAATTTTATTCAGAGACTTTCCTTAGCAGTTGGAGGACCACCTAAACTTCGAATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGACGCCGCTTGGCAGCTTATGCTGAAATATTTAAGGTGCCATTTGAGTATAATGCTATAGCAAAAAAGTGGGAAACAGTTCAGCTTGAGGAACTAAAGATTGATAGGGATGAGTACCTCGTTGTTACCTGTTTTTATCGCGGTAAAAATGTGCTTGATGAATCTGTGCTTGTGGACAGTCCAAGGAACAAATTCCTCAGTTTGATAAGGAAGATCAACCCGGATTTATTCATTCATGGCATTACTAACGGGGCCTTTAATGCGCCTTTTTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTTTTTGACATGCTTGAAACTATTGTGCCTCAAGAGGATTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGCAGGGAAGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACTTATAGGCAGTGGCAAGCCCGGATTCTTAGGGCTGGATTTTCACAACAATCTTTTGAACATGCTTTAGTAAAGAGGGCAATAGAGAAAGTATCAACTAGCTACCACAAGGATTTTGTTATTGATGAAGATAGCCAGTGGTTGTTACAAGGTTGGAAGGGGCGAATTGTTTATGCCCTTTCTTGTTGGAAACCAGCATGA 2211 0.4166 MQRLVLMDPRICGFSGPSNEVRLGNQRFENDFFDQSREFGYLQSNLVPNKTPSASSVLSHEEPSPEECEFSDAILSYISQILMEEDMEDKTCMLHDSLDLQIAERSFYEVIGEKYPSSLLENPSPVDPDGGVGDRNFSENYGTCSYNDGDLSSILTNFRQNLGEFPNHNLRGNSISQSSCSSSNSVISSVEGPVDSPSSILQVPDLNSESQSILQFQKGVEEASKFLPSGIGLFANLGAANFSKLEPKMGSAELSVKVEKDVGDSFLAGSKVRKHHLGEEADDEENRSSKQAAIFSEPTLPSTSMDAILLHSLGDGRKLFMARREALQTKSDKTALSNGKSKASNSGKGRSKKQSGKKEVVDLRTLLVLCAQAVAADDYNGAHEFLKRIRKHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMASFVSNITIRTSSSNSARVHVIDFGILYGFQWPNFIQRLSLAVGGPPKLRITGIDFPQPGFRPAERIVETGRRLAAYAEIFKVPFEYNAIAKKWETVQLEELKIDRDEYLVVTCFYRGKNVLDESVLVDSPRNKFLSLIRKINPDLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPQEDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFSQQSFEHALVKRAIEKVSTSYHKDFVIDEDSQWLLQGWKGRIVYALSCWKPA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1236 736 MobiDBLite consensus disorder prediction 330 357 - -
Pvu8g1236 736 MobiDBLite consensus disorder prediction 331 350 - -
Pvu8g1236 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
Pvu8g1236 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 735 IPR005202 -
Pvu8g1236 736 Pfam GRAS domain family 363 734 IPR005202 -
Pvu8g1236 736 PANTHER SCARECROW-LIKE PROTEIN 9 38 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1236 Pvu-Chr8 15192440 15196300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1236 66 735 GRAS Transcription Factor Family AT2G37650 52.256 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g1236 GRAS 4.2e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1236 - - gmx:100801824 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1236 8 15192440 15196300 Pvu8g1236 8 15192440 15196300 ECH