LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g1223	ATGGACCTTAATCTTGAGCAACTGAGACTAGGAGGCACTCTTACACTATTCATAGGAAACCTTTCTTCTTTCTCTCGAATTAGCTTTGGGTTAAACAACTTCATTGGAAGCATACCACACGAGATAGGCCTTTTATCAAGCTTGACATATCTGGTGTTATATGCGAATTACTTGTCTGGCTCAGTTCCTTCTTCAATCTATAACAAATCTTCATTATACTATTTCACTTTTACTCAAAACCATCTTCATGGGAACTTACCAGCTGATGTTGGAATTACTCTTCCTACATTCAAGTATTTGTTGATTCTTGATTTCTCCTTGAATGGTCTCACTGGAGCACTGCCAACGAACTTAGGGGTCTTGAACAAATTAGCTAGACTTAGCTTTGAACACAACAGACTGGGAACTGGGAAAACAGATGATGTTAGCTTTCTTGATTATTTGGTTAACTGCACTGTTCTACAAGTTTTACGTCAAGGAGTAAATAATTTTGGTGGAGTATTGCCTAAAGCAATTGCTAATTTCTCAAGCCAAATGCACACATTTTCCTTTAATTTCAATGGAATACATGGAAATATACCTGTTGGAATTGTCAATCTTGCTAACCTGGCCCTCATAGCTTTGGAAGGACACCGTCTAACTGGTAGTCTTCCTGATGCATTAGGTAGGCTGAAAAATCTGAGAGAATTGTATCTGAATGTCAACAAATTTTCAGGTAGAATCCCATCCTCCTTGGGAAATTTGTCTGTATTAATAAAACTCTTTCTGGAGGAGAACAACTTTGAGGGAAGCATCCCTTCTAGTCTTCGAAACTGCCAAAATTTATTGGTACTCAACCTTTATAGCAACAAACTCAGTGGCACCCAACCAGCTGAAGTTATTGGCCTTTCTTCACTAGCAATATATTTAGATGTATCTCATAATGCTTTCTTAGGGACTCTTCCAGCTGAAGTGAGTGAGCTACATAACCTTGGAGATGGTGCTCTATGTGGGGGTGTCCCAGAACTAAATTTCCCTGCATGCACTGTCAGGAAAGCTTCTCTGGCAAGAAGACTTCTTGCTCTTAAGGTGGCTATCCCTATAGCTTGTGCGCTTGTATTACTATTAATTCTATCATGTTTTCTTAAACTGCTCCCCATAGTTAAAAGATCAAAAAAGAAAACTCCTACATCAACTACTGAAAGGGATTTGGAATTGAAAATTTCTTACTCAGAAATTACCAAGTGCACTGATGGATTTTCACAGGATAACCTGATTGGTTCGGGAAGTTTTGGTTCTGTATACAAAGGAACTCTGTCAGGTGATGAATCTAGTGGTACAGTTAAAGTATTAAACCTTCAACAGAGAGGAGCATCTAAGAGCTTCATTGATGAATGCCAAGTTCTGAGAAGCATAAAGCATCACAACCTTCTGAAGATCATAACTGCCATATCAGGAGTTGATCATCAAGGCAATGACTTGAAAGCTCTAGTGTTTGAGTACATGCCTAATGGAACTATTGATGTTGCTTGTGCACTGGAATATCTCCATCACTTCTGTGAAACTCCAATTGTTCATTGTGACATAAAGCCAAGCAATGTGCTTCTTGACAATGATATGGTTTCCCATGTTGGGGACTTTGGATTAGCTACATTTCTGTTTGAAGAATCAAGCAAGTTATCCACACAACCAGTTATGTCAGCTAGCCTAAGGGGTTTTATTGGCTACATCCCTCCGGAGTATGGTATGGGTGGGAAGCCTTCTACACTTGGAGATATATACAACTATGGGATACTATTACTGGAGATTTTCACAGGAAAAAGACCTACAAATGAAGCATTTGAAGGTGCACGGGAACTCAGTAGTTTGTAG	1851	0.3917	MDLNLEQLRLGGTLTLFIGNLSSFSRISFGLNNFIGSIPHEIGLLSSLTYLVLYANYLSGSVPSSIYNKSSLYYFTFTQNHLHGNLPADVGITLPTFKYLLILDFSLNGLTGALPTNLGVLNKLARLSFEHNRLGTGKTDDVSFLDYLVNCTVLQVLRQGVNNFGGVLPKAIANFSSQMHTFSFNFNGIHGNIPVGIVNLANLALIALEGHRLTGSLPDALGRLKNLRELYLNVNKFSGRIPSSLGNLSVLIKLFLEENNFEGSIPSSLRNCQNLLVLNLYSNKLSGTQPAEVIGLSSLAIYLDVSHNAFLGTLPAEVSELHNLGDGALCGGVPELNFPACTVRKASLARRLLALKVAIPIACALVLLLILSCFLKLLPIVKRSKKKTPTSTTERDLELKISYSEITKCTDGFSQDNLIGSGSFGSVYKGTLSGDESSGTVKVLNLQQRGASKSFIDECQVLRSIKHHNLLKIITAISGVDHQGNDLKALVFEYMPNGTIDVACALEYLHHFCETPIVHCDIKPSNVLLDNDMVSHVGDFGLATFLFEESSKLSTQPVMSASLRGFIGYIPPEYGMGGKPSTLGDIYNYGILLLEIFTGKRPTNEAFEGARELSSL*	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g1223	616	SUPERFAMILY	RNI-like	2	324	-	-
	Pvu8g1223	616	Gene3D	Phosphorylase Kinase; domain 1	393	491	-	-
	Pvu8g1223	616	Gene3D	Ribonuclease Inhibitor	1	143	IPR032675	-
	Pvu8g1223	616	Gene3D	Ribonuclease Inhibitor	144	338	IPR032675	-
	Pvu8g1223	616	SMART	serkin_6	413	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g1223	616	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	9	100	-	-
	Pvu8g1223	616	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	500	609	-	-
	Pvu8g1223	616	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	324	499	-	-
	Pvu8g1223	616	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	101	324	-	-
	Pvu8g1223	616	SUPERFAMILY	Protein kinase-like (PK-like)	387	605	IPR011009	-
	Pvu8g1223	616	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED	101	324	-	-
	Pvu8g1223	616	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED	324	499	-	-
	Pvu8g1223	616	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED	500	609	-	-
	Pvu8g1223	616	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED	9	100	-	-
	Pvu8g1223	616	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	517	529	IPR008271	GO:0004672\|GO:0006468
	Pvu8g1223	616	ProSiteProfiles	Protein kinase domain profile.	413	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g1223	616	Pfam	Protein kinase domain	414	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g1223	616	Gene3D	Transferase(Phosphotransferase) domain 1	492	615	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g1223	Pvu-Chr8	14935813	14938949	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g1223	12	615	Receptor kinase-like Gene Family	AT3G47570	37.333	3.49e-121	381

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Pvu8g1223		Pkinase	2.5e-26	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g1223	-		-	pvu:PHAVU_008G118500g	1177.93