Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1193 ATGGAAGCCACTTCCATAACGTCGTTGTTGAAGGGCTTTTGTGATCACACACAATGGAAATATGCTGTTTTTTGGAAGCTTAACCACCATTTTCCTATGAATTTGACTTGGGAAAATGGTTACCAGAAAGGAAATGAGGTTAAGGAAAGTATGTGGGATGACTTCAATTTCAAGTCCCCACATGAGTTATATTCTTCAAGAGGTGAAAGTACTGATTATTCAGGAGATTATTCAGTTCGACTACTCATGATTGAGATGTCTCATCGTAAATACAATTTTGGAGAAGGGGTTGTTGGCAAAGTAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATATTCTTACCGGTAAATTTGACACTGATTTAATCCCTGAGTGTCATGATGAGTGGCTTCTTCAAATTGCATGTGGCATCAAGACTATTGTGCTGGTACCGGTACTTCCTCTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGGTTGCTGAAGATTTGGAATTTGTTACAAATGTGAAGGATAAGGTCCAATCCATTGATTGCACGGAAGCAAATATTAACCCTTTCAACATGCGAACTGATTATCAAGATTGGTCATTCTCAGACCTAATGCATAATTTGATGGATAGCTTGGATGAATCATCTTCTGTTACTAAAACCATATTGAAAAGTGAAGTTTCTACCAGTACTGCTTTGCACAATGAAAATGGTTCAAGAAGGCTGAACCCAACAATGCTATCATTTATTCAAGATGACTGTTGTGTGTCTAGACAAGATCTACTAAAATCTATGAAAAGGGAAAATGTAAATGAGATAGGTTCCTCATCACTTGATATGTCAACTGTTTCTAGACATATTGGTAAGATGGAGACAAAACCAAATCACATGGAAGAAGAGATGTGGTCCTGGTCAGTTTTTGAAGAGATGTCAAATGGATTAGACTCTTTCTCTGTTAACAATATGACAGGGAAACAATTTGGAGGCACTGAAAGTGGTTATGATGATGCAAAGAATATCAACGACTTCAATTTTCCCTCAGAGTCAGAATTGCACAAAGCACTTGGATCAGTTGCATACTCTGTTGGTGATACATACCATACCTCATGTCTGATAACTAATAAAAAAGAGAATGATCATATTAAAGGTTTTGAGCTTCCCGAAGATCTTGATCCAGAAAATCTTCTAGATGCTGTTTTTGGCAATTTGTGCAGTTCTGCCGATGATACATCTAGTATTTCGAACAGTATCAGGTCTCTTACAACTATGCCAACAGAGATTAGTGGTTCCATTCAACCAAAAAATAATTCAGATGTGAAAAAAGATCTTGTGGCTGCAGTTACCGCCAAGAGAAAATATGAATTTTCTAACCCTTTTACATCATCTTTTGATGGAAATGGAAGCTTATTGATTGATGAGGTGCAACAGGAAAAGGAAGATGATCATATGCTGCCAATTAGTGGACCGAAGCTCTCTAGCACACACAAGAAAAGAACAAGAGTTGCTAACAACCAAAAGGCAAGGCCAAGAGATAGACAGCTTATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGAAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTCTACTTGAGAAAGATAACAAGTCAGGCTGAGAAACTGAAACGATTTGCAAATCGAACGGTTGCTGAGAGCAAAAGACAGAAAATCAATGGTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTGGAATGCACAGGGCACATGCTCATTGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGTGATCCGGAAGCTGGAAGTCACCATCTTGAAAGGGATCTTGGAAAACCGTTCTAGCGATAGCTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTATGTCCGTTACTGCATCTTCTGCAGCTTAAGAGAAACCCTATCTCGTGCAAAAGCTGA 2040 0.3966 MEATSITSLLKGFCDHTQWKYAVFWKLNHHFPMNLTWENGYQKGNEVKESMWDDFNFKSPHELYSSRGESTDYSGDYSVRLLMIEMSHRKYNFGEGVVGKVALARDHCWVSCEDILTGKFDTDLIPECHDEWLLQIACGIKTIVLVPVLPLGVLQFGSFEEVAEDLEFVTNVKDKVQSIDCTEANINPFNMRTDYQDWSFSDLMHNLMDSLDESSSVTKTILKSEVSTSTALHNENGSRRLNPTMLSFIQDDCCVSRQDLLKSMKRENVNEIGSSSLDMSTVSRHIGKMETKPNHMEEEMWSWSVFEEMSNGLDSFSVNNMTGKQFGGTESGYDDAKNINDFNFPSESELHKALGSVAYSVGDTYHTSCLITNKKENDHIKGFELPEDLDPENLLDAVFGNLCSSADDTSSISNSIRSLTTMPTEISGSIQPKNNSDVKKDLVAAVTAKRKYEFSNPFTSSFDGNGSLLIDEVQQEKEDDHMLPISGPKLSSTHKKRTRVANNQKARPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRFANRTVAESKRQKINGSHPGRSCAFDFESELAWPIVIEDLECTGHMLIEMICNEHGLFLEIAQVIRKLEVTILKGILENRSSDSWACFIVEVPRGFHRMDVLCPLLHLLQLKRNPISCKS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1193 679 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 678 IPR043561 GO:0003700|GO:0006355
Pvu8g1193 679 MobiDBLite consensus disorder prediction 479 507 - -
Pvu8g1193 679 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 174 IPR025610 -
Pvu8g1193 679 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 498 547 IPR011598 GO:0046983
Pvu8g1193 679 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1193 Pvu-Chr8 14184849 14191687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1193 330 673 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.605 4.64e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1193 - - gmx:100820605 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1193 8 14184849 14191687 Pvu8g1193 8 14184849 14191687 ECH