Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1191 ATGGTTCCATTAAGCACTTTCATGGACCAACCTACCATTATTACAATGCTAATATTCACAACTATGGCATTGTTACTATCTCGCGCCGAGGCCATGCGAAAGTGCGGGAATTGCGGTCCGAACCCGGTTCCTTACCCATTAAGCACGGGACCCGATTGTGGCGACCCGTGGTACAAGATCCGTTGCACGGCGGGTACACTCTGGTTCGACGCACTCGCCGGATCATCCTACGCGATCAAGTCCATTGACCCGTCCACCCGTCGGATCATAACCCGACCCCCCACGCTGGCTCCAAAAACCTGCGTGTCCACGGACTTCCGCAGCGAAGGCATGCACCTGAACGAGACCCTTCCTTTTAGCGTGGCTTCGGGGAACGCCATTTTTCTCTTCAACTGCACCGCCCACGCGCCTTCGATGAACTGCTCCGCAAGCAGCGCGTGCCACAGCTATATTAAGGAGCACGCAGATTTCGGCGCGTGCGGCAGCGCGGGCTCGTGCTGCGAGTACCGGAGTGGTGGGGCGCGCAAAGAGTTCGCGATTCGCTTGCACGGCGGAGAGTGCGCGGCGTATGCGGGTTTTGTGGATTTAAACGGCACGGCGGCGACTGTGGGGAAGCGGTGGCCGGAGAGTGGGGTGGGGATCGAGTGGGTGGCACCACAGGAACCGGTCTGTAAGGAGACTATGGATTGCAAGGAATTGTTGAACTCAAAGTGTGGAGTGGGGCCCAGTGGTGGGGTGCACAGGTGCTTCTGCAATGCTGGGTTTGCGTGGGACCCCATCAATGGGTGGTGTCAACCCCAAACTCAGACAAACAACACAAAGTGCACAGGACATGGAAAAGACAGCCACTGCAAAGTTCGGAAGAAGAAGAAGAAGAAGATGCTTTTGGCTGTGGTTGTTTCCTTAGGAGGAATAGTCTTTGTTCTAACAGTCATAGGAGTCCTTTTCTACAAGAAGCATAACCAAACAAAAGGAAAAGCAAAGGAGGCTAAAATCAGTAAGAGAAAAGAAGTGTCAAGTGCCAAAGCCAACGCTTTATCATCCAGAATCTTCACTGGCAGAGAGATAAAAAAGGCAACCAACAATTTCTCCCCAGAAAACCTCATTGGCACTGGTGGCTTCGGTGAAGTCTTCAAGGGGACATTCGATGATGGAACCGTCTTTGCCATCAAGCGTGCCAAGCTTGGAAGCACCAAAGGCATTGATCAGATGCAAAACGAGGTTCGAATTCTGTGCCAAGTAAACCACAGAAGCTTGGTGAGACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTGCTAATATACGAGTTAGTATCAAATGGGACCCTTTTTGATTACCTTCATCGCCACTCTTGTGGCACAACCGAACCCCTCAAATTGCACCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGGCTTTCATATCTGCATTCTTCAGCTGTGCCACCCATTTACCACCGAGACGTGAAATCAAGCAACATACTTCTTGATGACAAGCTTGATGCCAAGGTTTCTGACTTTGGCTTATCAAGGCTTGTTGAATTGGCTGAAGAAAACAAGAGCCATATCTTCACTAGTGCTCAAGGGACACTAGGGTACCTAGACCCTGAGTACTATCGTAACTTTCAGTTGACCGATAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTGATGGAGTTGCTCACTGCTCAGAAAGCCATTGATTTCAACAGGGAAGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGAGAAGTTGATGGATGTGGTTGATCCTTTCCTTAAAGAGGGAGCTAGTGATTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTCGCAGTTTCATGCTTGGATGACCAGAGGCAAAAACGGCCTTCGATGAAAGAAGTTGCTGATGAGATTGAATACCTGATTAAAGTTATTAAAGGTCAAGTTTCCAAATCATGA 1968 0.4939 MVPLSTFMDQPTIITMLIFTTMALLLSRAEAMRKCGNCGPNPVPYPLSTGPDCGDPWYKIRCTAGTLWFDALAGSSYAIKSIDPSTRRIITRPPTLAPKTCVSTDFRSEGMHLNETLPFSVASGNAIFLFNCTAHAPSMNCSASSACHSYIKEHADFGACGSAGSCCEYRSGGARKEFAIRLHGGECAAYAGFVDLNGTAATVGKRWPESGVGIEWVAPQEPVCKETMDCKELLNSKCGVGPSGGVHRCFCNAGFAWDPINGWCQPQTQTNNTKCTGHGKDSHCKVRKKKKKKMLLAVVVSLGGIVFVLTVIGVLFYKKHNQTKGKAKEAKISKRKEVSSAKANALSSRIFTGREIKKATNNFSPENLIGTGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYELVSNGTLFDYLHRHSCGTTEPLKLHQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEEKLMDVVDPFLKEGASDLELETMKSLGYLAVSCLDDQRQKRPSMKEVADEIEYLIKVIKGQVSKS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1191 655 CDD STKc_IRAK 369 642 - -
Pvu8g1191 655 SUPERFAMILY Protein kinase-like (PK-like) 338 640 IPR011009 -
Pvu8g1191 655 Gene3D Transferase(Phosphotransferase) domain 1 439 653 - -
Pvu8g1191 655 Pfam Protein kinase domain 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1191 655 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 23 650 - -
Pvu8g1191 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Pvu8g1191 655 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1191 655 Gene3D Phosphorylase Kinase; domain 1 321 438 - -
Pvu8g1191 655 SMART serkin_6 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1191 655 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 650 IPR045274 GO:0007166
Pvu8g1191 655 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1191 Pvu-Chr8 14073038 14075756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1191 34 655 Receptor kinase-like Gene Family AT5G02070 55.696 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu8g1191 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1191 - - aprc:113862410 1022.69