Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1166 ATGAACACTATTATCCGCCACCGCCTATGGCTAATTCCAACACCTCTTATCCATTCTTTCCCCAAATTCCCTTTTCTTCAATCCTCTCTCTTCTTCTCTTCAACCACTTCTGATCCCATCTCCTTCACTGTATCCTACCTTACCAACACCTGTGGCTTCTCTCCCGAGGCCGCTCTAAAACTATCCAAACGACTTCGTTTCTACAGCGCCCACAAAACCGATTCCGTCATCTCCTTCTTCCGAACCCACGGTTTCTCCGTCCCCCAGATCCACCAGATCTTCAGCAAAGCTCCCGATGTCATGCTATGCAACCCCACCCGAAGGATTCTCCCCAAATTCCACTTCTTGGCCTCCAAAGGCGCTTCTCCCTCCGACACCCTTCTCCTCGTCGCTAAGAACCCCCGCTTCCTCCTTCACAGCCTCAACAACCACATCTCTCCCATCTTCCAACTGCTCCGAACGTTCTTTCCCTCCGACCTCAAAGCCCTCGCTATTGTCATAGCCTTTCCCTATATCATCGGCGACAATCGCTTCGCGTTCAACGTTGAAATGTTGCGGAAAGCCGGAGTCTCGCACTCCGGCATTCGGCGCTTGCTCTGCTCTCGGTCGTCGGTTCTCTGCTCCGACCTGAGAACCGTCTTGGAGGAAGTGAAGCTGTTGGGCTTTGACCCTTTGAAGGTGTCCTTCGTTGTGGCCATTGTGGCCAAACGTACTGTTTGGAAACCCCTTTGGGATGCCAAAGTCGACGCCTTGAAGAAATGGGGTTGGTCTGAGGACGAGGTTTTGGTTGCGTTTAGGAAACAGCCTACAATGATGCTCTGCTCCAAGGAGAAACTTAATGCAGTGATGGGGTTTTGGGTTGGTCGGCTTGGATGGGATCGTTCCACGCTTATTGCGTACCCATCGATGTTTTCGTTCAGTTTGGAGAAAAGGGTTGCTCCGAGGGCTTTGGTTTTGCAGTATCTTCTCTCCAGAGGATTGTTGAAGAAGGGCGCTAGCTTGGTCACACCGTTTGTTAGGTCTGACGAGGAGTTTCTGCAAAACTATGTGAGACGTTTCAAGGTGGAAACGCCCAGGTTACTTGAGCTATATCAGGAGGGATCGGGAACATGCTAA 1116 0.5116 MNTIIRHRLWLIPTPLIHSFPKFPFLQSSLFFSSTTSDPISFTVSYLTNTCGFSPEAALKLSKRLRFYSAHKTDSVISFFRTHGFSVPQIHQIFSKAPDVMLCNPTRRILPKFHFLASKGASPSDTLLLVAKNPRFLLHSLNNHISPIFQLLRTFFPSDLKALAIVIAFPYIIGDNRFAFNVEMLRKAGVSHSGIRRLLCSRSSVLCSDLRTVLEEVKLLGFDPLKVSFVVAIVAKRTVWKPLWDAKVDALKKWGWSEDEVLVAFRKQPTMMLCSKEKLNAVMGFWVGRLGWDRSTLIAYPSMFSFSLEKRVAPRALVLQYLLSRGLLKKGASLVTPFVRSDEEFLQNYVRRFKVETPRLLELYQEGSGTC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1166 371 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 366 - -
Pvu8g1166 371 Pfam mTERF 247 346 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 Pfam mTERF 77 236 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 PANTHER CGI-12 PROTEIN-RELATED 36 366 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 127 157 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 163 191 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 196 223 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Pvu8g1166 371 Gene3D Transcription termination factor 3, mitochondrial 158 356 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1166 Pvu-Chr8 13531249 13532714 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu8g1166 mTERF 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1166 K15032 - gmx:102666739 315.849