Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1164 ATGTACACGTTACCTGATTGGTTCCCTATGTTATCGACGGCCAACGCAGACGGGGTTCCGGAGCCATACAACTCGACTGTGGCGGCACGTCTGGGGCGGCGGCGGATTCCGATAAACACGACGTTCTACTGGGGGCATAAGGTGGACATACTTTTCCGGTGCTGGCCGGGCGACAGCGCCGCCATGTACGCGGTGGCGCTTCTCCTCGTGTTCTTTATGGCTGTGCTGGTGGAGTGGCTCTCTTTCACCAACATTGTGAAACTCAAGCCCGGGGGATCAAACGACGTCGTTGGAGGGCTCCTCAAGACGGGGTTATACGGCGTGCGTTCGGGGCTCTCTTACTTGGTGATGTTGGCCGTTATGTCTTTTAACGGTGGCGTGTTTGTCGTCGCTATAAGCGGCCACGTCATCGGATTCTTGATTTTCGGAACAAGGGCTTTAAGGAAGAAATCCAGTGGTTTGGACTCTTCGAAACCGTAG 480 0.5521 MYTLPDWFPMLSTANADGVPEPYNSTVAARLGRRRIPINTTFYWGHKVDILFRCWPGDSAAMYAVALLLVFFMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFVVAISGHVIGFLIFGTRALRKKSSGLDSSKP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1164 159 Pfam Ctr copper transporter family 41 83 IPR007274 GO:0005375|GO:0016021|GO:0035434
Pvu8g1164 159 Pfam Ctr copper transporter family 100 142 IPR007274 GO:0005375|GO:0016021|GO:0035434
Pvu8g1164 159 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 19 150 IPR007274 GO:0005375|GO:0016021|GO:0035434
Pvu8g1164 159 PANTHER COPPER TRANSPORTER 4 19 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1164 Pvu-Chr8 13507764 13508727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1164 41 151 Inorganic Solute Cotransporters AT5G59030 50.450 1.15e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1164 K14686 - gmx:100803410 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1164 8 13507764 13508727 Pvu8g1164 8 13507764 13508727 ECH