Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1099 ATGGTGTTCTTATTTCCAACGTTTCAGTTCATGAAGCTCCTATCATTATGGCTGCTTCTACTTGTAATGGCCAATTCTCTCCATGCAGCATTGTCTTCCTCACTCTCACTTCAACACACAGAAGCAAACGCTCTGCTGAAGTGGAAAGCAAGCCTTGACAAGCAAAGTCAAACATTACTATCTTCATGGGATGGCAATACTTCTTGCAGTTGGCTTGGAATTTCTTGTGACTACTCAGGATCAGTCTCCAACATAAATCTTACAAACATTGGATTAAGTGGTACGCTTCAAACTCTCAATTTTTCATCACTTCCAAACATCCTCACTCTAGACATGAGTCTTAACTCCTTGAGTGGAAGTATTCCTCCTCAAATTGGAGTCTTATCCAAACTCACTCATCTTGATTTAAGTCTCAATCATCTCACTGGACCAATTCCTTCTGAAATAACTCACTTGGTCAATCTTCACTTTTTACATTTGGTAAATAATGTTTTCAATGGTTCTATTCCTGAAGAAATAGGTGCTTTAAGGAATTTGAGAGAGATTAAAATTGAATTGGCCAATCTCACCGGGACAATCCCAAATTCTATTGGAAAGCTATCATTCTTGTCAATACTTTCTTTATGGAATTGCAAACTCACAGGATCTATTCCAAAATCTATTGGAAATTTGACCAGTCTGTTAATTCTAGAATTTTCGCTCAACAAACTTTACGGACATATTCCTCACGAAATTGGGAATTTGTCAAACTTAGAGTTGTTGGGCCTTGGAGGTAATAACTTATATGGTAGTATTCCTCAAGAAATAGGTAAGTTGCAGAACCTAAATGTGCTATATATACCTGCAAACAATTTATCTGGAAACATTCCCGTGGCAATTGGGAAGTTGTTCAACTTGACGCAGTTATATCTATCCAATAATAATCTTTCGGGTTCTATTCCTCAAGAAATTGGAATGATGACAAATTTGGATCAACTTGATTTGTCCGAAAACTCTTTGTCAGAAAATAATATTTCTGGGTCAATTCCATCTTCCATAGGTAACTTGGTCAATTTGAAATCTATTCGTCTTGACAGAAACAAACTCTCCGGAACAATTCCTTCCACTATTGGTAACTTGACAGAGCTCACCACACTTGTTTTATTCTCAAATCAGCTGAGTGGACACATTCCAATAGAAATGAATATGCTTAACAACCTGGAAACATTGCATTTATATGAAAATAATTTCATTGGTCATTTGCCTCACAATGTTTGCATCAGTGGAAAGTTGCTTAAGTTTACTGCTAACAATAACTATTTCATGGGTCCAATACCTAAGAGTTTGAAGAATTGCACCAGTCTCAAAAGAGTTTGGCTTCAACAAAACCATTTGACAGGAAATATAACAGAGGATTTGGGTGTATACCCAAACTTGGATTACATAGATCTGAGAAGCATTCCACCAGAACTAAGTCAGGCAACCAGGTTACAAGTACTTCAATTGTCTTCAAATTACCTCACGGGAGACATTCCTGAACATTTAGGTAATTTGACCTACTTGTTCGAACTCTCTCTCAATAATAATAATCTTTCGGGGAATGTTCCTATACAAATAGCAACATTGCAAAATCTTGAGACCTTAGAGCTCGGAGCAAATAGTTTTTCTGGCTTAATTCCAAATCAACTTGGTAATTTGGTCAAGTTATTACATTTGAATTTGAGCCAAAATAAATTTAGGGAAAATATTCCATATGAGTTTGGTAAATTAAAATATCTTCAAAGTCTTGATCTTAGCATGAACATTTTGAGTGGAAGAATACCATCAATGCTAGAAGAGTTGAAAAGCTTAGAAACATTAAACCTCTCACACAATCATCTTTCAGGCGATCTCTACAGCCTTGATGAGATGATAAGCTTAACATCTGTTGATATATCATACAACCAATTAGAGGGTCCACTTCCAAACATTTCAGCCTTTCAGATGGCTACTGTCGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCGCAGGCCTGGAACCATGCCCAACATCACGTGACCAATCTCAAAATCATAAGACTAACAAAGTCCTATTGGTTATTCTAGCCATTGGTTTGGGCACTTCCATGCTAGCATTATTTGTCTTTGGAGTCTTATATTATCTTTGTAGAAGGTTAAAGACAAAAGAACATCCGGATGTAGAATCATTATGCCAAAATCTTTTTGCGATATGGAGTTTTGATGGAAAGATGGTGTATGAGAACATAATTGCAGCCACAGAAGAGTTTGATAATAAACATCTCATTGGAGTTGGAGGACAAGGAAGTGTTTACAAAGCTGAATTGCAAACAGATCAAATTGTTGCTGTTAAGAAACTCCATTCAGTACAAAATGGAGAAATGTTGTACAATGATAAAGCTTTCAAAAGTGAAATTCAAGCTTTGACAGAGATTCGACATCGTAATATTGTGAGGCTATTTGGGTTTTGTTCTCATTCCCGATACTCATTTTTGGTGTATGAGTTCTTGGAAAAGGGGAGCATAGAAAAGATTTTAAAAGACGATGAAGAGGCAATTGCATTTAACTGGAATAGGAGGGTTGATGCCATTAAAGGAGTAGCAAATGCTTTATGCTATATGCATCATGATTGTTCACCTCCAATTGTTCATCGAGATATATCAAGCAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAACTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTGGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACACAATGAAAGTAAATGAAAAATGTGACGTGTACAGCTTTGGGGTATTGGCTCTAGAAATACTTTTTGGAGAGCACCCTGGAGATTTTGTAACTTTGTTACTGTCTACATCCAATGCCATGGATTCAACACTTGATATTCCTTCATTGTTGGGTAAGTTAGATCAACGTCTCCCATATCCTACAAATATTGCTAAGGAGATAGCTTCGATTGTAAGGATAGCAAGTGTTTGCTTGACTGAAAGTCCCAGTTCTCGTCCTACCATGGAGCAAGTTGTCAACTACTCTTCAATGTAG 3099 0.3682 MVFLFPTFQFMKLLSLWLLLLVMANSLHAALSSSLSLQHTEANALLKWKASLDKQSQTLLSSWDGNTSCSWLGISCDYSGSVSNINLTNIGLSGTLQTLNFSSLPNILTLDMSLNSLSGSIPPQIGVLSKLTHLDLSLNHLTGPIPSEITHLVNLHFLHLVNNVFNGSIPEEIGALRNLREIKIELANLTGTIPNSIGKLSFLSILSLWNCKLTGSIPKSIGNLTSLLILEFSLNKLYGHIPHEIGNLSNLELLGLGGNNLYGSIPQEIGKLQNLNVLYIPANNLSGNIPVAIGKLFNLTQLYLSNNNLSGSIPQEIGMMTNLDQLDLSENSLSENNISGSIPSSIGNLVNLKSIRLDRNKLSGTIPSTIGNLTELTTLVLFSNQLSGHIPIEMNMLNNLETLHLYENNFIGHLPHNVCISGKLLKFTANNNYFMGPIPKSLKNCTSLKRVWLQQNHLTGNITEDLGVYPNLDYIDLRSIPPELSQATRLQVLQLSSNYLTGDIPEHLGNLTYLFELSLNNNNLSGNVPIQIATLQNLETLELGANSFSGLIPNQLGNLVKLLHLNLSQNKFRENIPYEFGKLKYLQSLDLSMNILSGRIPSMLEELKSLETLNLSHNHLSGDLYSLDEMISLTSVDISYNQLEGPLPNISAFQMATVEALRNNKGLCGNVAGLEPCPTSRDQSQNHKTNKVLLVILAIGLGTSMLALFVFGVLYYLCRRLKTKEHPDVESLCQNLFAIWSFDGKMVYENIIAATEEFDNKHLIGVGGQGSVYKAELQTDQIVAVKKLHSVQNGEMLYNDKAFKSEIQALTEIRHRNIVRLFGFCSHSRYSFLVYEFLEKGSIEKILKDDEEAIAFNWNRRVDAIKGVANALCYMHHDCSPPIVHRDISSKNVLLNLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMKVNEKCDVYSFGVLALEILFGEHPGDFVTLLLSTSNAMDSTLDIPSLLGKLDQRLPYPTNIAKEIASIVRIASVCLTESPSSRPTMEQVVNYSSM* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1099 1032 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Pvu8g1099 1032 Pfam Leucine rich repeat 537 594 IPR001611 GO:0005515
Pvu8g1099 1032 SMART LRR_typ_2 397 421 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 248 272 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 128 151 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 559 583 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 349 373 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 296 320 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 535 558 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 607 634 IPR003591 -
Pvu8g1099 1032 SMART LRR_typ_2 152 176 IPR003591 -
Pvu8g1099 1032 Gene3D Transferase(Phosphotransferase) domain 1 838 1032 - -
Pvu8g1099 1032 PRINTS Leucine-rich repeat signature 131 144 - -
Pvu8g1099 1032 PRINTS Leucine-rich repeat signature 607 620 - -
Pvu8g1099 1032 SUPERFAMILY Protein kinase-like (PK-like) 744 1029 IPR011009 -
Pvu8g1099 1032 Gene3D Ribonuclease Inhibitor 429 686 IPR032675 -
Pvu8g1099 1032 SUPERFAMILY L domain-like 44 331 - -
Pvu8g1099 1032 Gene3D Phosphorylase Kinase; domain 1 720 837 - -
Pvu8g1099 1032 ProSitePatterns Tyrosine protein kinases specific active-site signature. 883 895 IPR008266 GO:0004672|GO:0006468
Pvu8g1099 1032 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Pvu8g1099 1032 ProSiteProfiles Leucine-rich repeat profile. 609 631 IPR001611 GO:0005515
Pvu8g1099 1032 Gene3D Ribonuclease Inhibitor 334 423 IPR032675 -
Pvu8g1099 1032 SUPERFAMILY RNI-like 333 649 - -
Pvu8g1099 1032 ProSiteProfiles Protein kinase domain profile. 758 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1099 1032 ProSiteProfiles Leucine-rich repeat profile. 298 320 IPR001611 GO:0005515
Pvu8g1099 1032 Pfam Protein kinase domain 759 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1099 1032 Gene3D Ribonuclease Inhibitor 263 333 IPR032675 -
Pvu8g1099 1032 Gene3D Ribonuclease Inhibitor 37 185 IPR032675 -
Pvu8g1099 1032 Gene3D Ribonuclease Inhibitor 186 262 IPR032675 -
Pvu8g1099 1032 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 253 334 - -
Pvu8g1099 1032 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 480 1029 - -
Pvu8g1099 1032 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 139 263 - -
Pvu8g1099 1032 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 333 477 - -
Pvu8g1099 1032 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 178 - -
Pvu8g1099 1032 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 480 1029 - -
Pvu8g1099 1032 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 333 477 - -
Pvu8g1099 1032 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 253 334 - -
Pvu8g1099 1032 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 178 - -
Pvu8g1099 1032 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 139 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1099 Pvu-Chr8 12184347 12187886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1099 19 931 Receptor kinase-like Gene Family AT4G08850 44.828 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g1099 Pkinase 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1099 - - gmx:100811066 1409.82