Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1097 ATGGAGGGGAGAGATGAAGATGTGAGGGTGGGAACCAACAGGTATGGAGAGAGGCAACCAATAGGAACAGGTGCACAGACTGAAGATGGCAAAGACTATAGAGAGGCTCCTCCAGCTCCATTGTTTGAGCCTAGAGAGTTAACATCATGGTCTTTCTATAGGGCAGGGATAGCAGAATTTGTGGCCACATTCTTGTTTCTTTATGTCACTGTTTTGACTGTGATGGGTGTGGCAAAATCTCCCAACAAGTGCTCCACAGTTGGTGTCCAGGGAATTGCTTGGTCATTTGGTGGAATGATCTTTGCCCTTGTCTACTGCACTGCTGGTATCTCAGGGGGTCACATTAACCCAGCTGTGACATTTGGGTTGTTCTTGGCACGCAAGTTATCTCTCACTAGGACAGTGTTCTACATGATCATGCAGTGCTTAGGAGCTATCTGTGGTGCTGCAGTGGTCAAGGGATTCCAATCAAACCAATATGAGAGGCTTGGTGGTGGTGCTAACACTCTGAGTAAAGGATACTCCAAAGGTGATGGACTTGGAGCAGAGATTGTTGGCACATTTATTCTTGTTTACACTGTTTTCTCTGCCACAGATGCCAAAAGAAATGCTAGAGACTCGCATGTTCCTATTTTGGCACCTCTGCCTATTGGTTTTGCGGTCTTTCTGGTGCACTTGGCTACAATTCCTATCACAGGGACTGGCATAAACCCTGCTAGAAGTTTAG 727 0.4649 MEGRDEDVRVGTNRYGERQPIGTGAQTEDGKDYREAPPAPLFEPRELTSWSFYRAGIAEFVATFLFLYVTVLTVMGVAKSPNKCSTVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTVFYMIMQCLGAICGAAVVKGFQSNQYERLGGGANTLSKGYSKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1097 242 TIGRFAM MIP: MIP family channel proteins 58 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 242 IPR034294 -
Pvu8g1097 242 SUPERFAMILY Aquaporin-like 45 242 IPR023271 -
Pvu8g1097 242 Pfam Major intrinsic protein 46 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu8g1097 242 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Pvu8g1097 242 Gene3D Glycerol uptake facilitator protein. 39 242 IPR023271 -
Pvu8g1097 242 MobiDBLite consensus disorder prediction 1 34 - -
Pvu8g1097 242 PANTHER AQUAPORIN PIP1-2 ISOFORM X2 1 242 - -
Pvu8g1097 242 CDD MIP 54 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1097 Pvu-Chr8 12154306 12155551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1097 1 242 Major Intrinsic Protein MIP AT2G45960 83.058 1.98e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1097 K09872 - gmx:100809467 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1097 8 12154306 12155551 Pvu10g0048 10 804280 807510 PCT