Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1085 ATGTTTTGTAATTGGTTTGATGCTTTGAATTGTTTTGGAAGGAGGGATGATCCTGCAAACCAGCCACATGAACAAGTGGTTGCAACTAAAAAGTTTAGCTTTAATTCATTGAGATCAGCAACAAAAGATTTTCATCCATCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCAGGTTGCTATCAAGTCTCTTTCTGTTGAGTCTAAACAAGGAACTTATGAATTTATGACAGAAATTGATATAATATCAAATATACGACATCCAAATCTTGTGGAACTGATTGGCTGCTGTATTGAGGATAGCCATCGAGTACTTGTTTATGAGTTTATGGAGAACAATAGCCTTGCAAGCTCTTTGCTTGGTTCAAAAAGTAAATATGTTTCTCTGGATTGGCCAAAGAGGGCTGCTATTTGTCGTGGCACAGCTTCTGGTCTTTGTTTTCTTCACGAAGAGACTCAACCAAACATTGTTCACAGGGACATCAAGGCCAGTAACATATTGTTGGATGGGAACTTTAATCCGAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACCCATGTTAGTACTCGAGTTGCAGGAACTGTGGGATATCTTGCACCGGAATATGCACTTCTGGGGCAACTTACAAAGAAGGCAGACGTTTATAGTTTTGGGATTCTCATGCTTGAAATAATAAGTGGGAAAAGTAGTAGCAAAGCTGCATTTGAAGAGGACTGTTTGGTTTTGGTGGAATGG 780 0.3949 MFCNWFDALNCFGRRDDPANQPHEQVVATKKFSFNSLRSATKDFHPSSKIGGGGYGVVHKGVLRDGTQVAIKSLSVESKQGTYEFMTEIDIISNIRHPNLVELIGCCIEDSHRVLVYEFMENNSLASSLLGSKSKYVSLDWPKRAAICRGTASGLCFLHEETQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFEEDCLVLVEW 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1085 260 SMART serkin_6 44 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1085 260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pvu8g1085 260 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 260 - -
Pvu8g1085 260 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 260 - -
Pvu8g1085 260 Gene3D Phosphorylase Kinase; domain 1 13 119 - -
Pvu8g1085 260 ProSiteProfiles Protein kinase domain profile. 44 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1085 260 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Pvu8g1085 260 SUPERFAMILY Protein kinase-like (PK-like) 23 245 IPR011009 -
Pvu8g1085 260 Pfam Protein kinase domain 45 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1085 260 PIRSF ILK 15 257 - -
Pvu8g1085 260 Gene3D Transferase(Phosphotransferase) domain 1 120 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1085 Pvu-Chr8 12028009 12031191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1085 27 260 Receptor kinase-like Gene Family AT1G53430 55.556 3.17e-87 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1085 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1085 - - gmx:100785766 464.922