Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1078 ATGGCATATCCAGAAGTGTCGTCCAACTCAAAGCCAGCAAGGGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCCGTGGCTTATGGTCCCGGAGAACCCCTCGTGGTGGAAGAAATTCTTGTTCATCCTCCTCACAAATCCGAGGTTCGAATCAAAATCCTCCACACTTCCATTTGCCACACCGATCTTAGTGCATGGCGAGGCGAGAACGAGTCTCAGCGTGCTTACCCTCGTATATTGGGCCATGAAGCATCCGGGGTTGTGGAGAGTGTGGGCGAAGGGGTGAGTGAGGTGGAGGAAGGGGACATAGTGGTGCCAATTTTCAATGGGGAGTGTGGAGAGTGTTGCTACTGCAAGTGCGAGAAGAGCAACTTGTGTGAGAGGTATGGGGTGAACCCCATGAAGAAGGTGATGGAAGGAGATGGCAGAACCAGATTCTCAACCGTTGATGGAAAACCCATCTTCCATTTCTTGAACACTTCCACGTTCTCGGAGTACACGGTGGTGGATTCCGCTTGTGTCGTCAAGTTTCGTCCCTCCGATCACGGTCTCACCACCAAAAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAG 598 0.5234 MAYPEVSSNSKPARDTKGKTITCKAAVAYGPGEPLVVEEILVHPPHKSEVRIKILHTSICHTDLSAWRGENESQRAYPRILGHEASGVVESVGEGVSEVEEGDIVVPIFNGECGECCYCKCEKSNLCERYGVNPMKKVMEGDGRTRFSTVDGKPIFHFLNTSTFSEYTVVDSACVVKFRPSDHGLTTKNLTLLSCGVST 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1078 199 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 16 199 - -
Pvu8g1078 199 SUPERFAMILY GroES-like 16 181 IPR011032 -
Pvu8g1078 199 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pvu8g1078 199 Pfam Alcohol dehydrogenase GroES-like domain 48 176 IPR013154 -
Pvu8g1078 199 PANTHER ALCOHOL DEHYDROGENASE 16 199 - -
Pvu8g1078 199 Gene3D - 26 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1078 Pvu-Chr8 11941874 11943103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1078 47 184 Monolignol Biosynthesis Gene Families AT4G39330 30.282 6.34e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1078 K00001 - gmx:100815166 304.293