Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1075 ATGGCGGCTTCTCACCAACAAGAACCATGGCTATTGGAAAACGGAAACCCGAAGGTGTTGACCAGGGAAATGAGACATGGACGCACTGCGCACAGCAAGTCCTCCAACTCACTTCGCAAGAAGTCTGATCGCACTCTTGTCTCCAAGGTTCCCTGTGCTACTCTTCGAAACGTGCTTCTCAACTTGCAAGAGGTTCTTCTTGGCACCAAGCTTTCCATTCTCATCCCTGCCATTCCTGCTGCCATTGTTGCTGAGTACTGTGGCTTTGGAAGACCTTGGGTTTTTTTGTTGAGCTTACTTGGACTTACCCCACTTGCTGAACGTGTGAGCTTCATCACTGAACAAGTAGCCTTCTACACAGGTCCCACAGTTGGAGGACTTCTGAACGCGACGTGTGGGAATGCTACTGAGCTCATAATAGCAATATTTGCCCTTAGCAGTAACAAAATTGCTGTGGTCAAGTTTTCTCTGTTGGGATCTATTCTTTCAAACCTTCTTCTGGTTCTTGGCACCTCTCTATTGTGTGGTGGCATTGCAAACGTTGGAGTGGAACAAAAATATGACAGAAGACAAGGAGATGTGAACTCACTTATGCTGCTGTTGGCATTGTTGTGCTACTTACTTCCTATGCTGTTCAAATATAGCGCTGCCTCAGCTGCACTCACGGTTGATCCTTCACTCTATTTGTCAAGAGCTTCTAGCATTGTGATGCTGATTGCATATGCTGTTTACATTATCTTTCAACTCTGGACACACAGGCGGTTATTTGAAGCTGAAGATGAGGATGAAGATGACAACAATGGTTCAGATGAAGAAGCTGTCATTGGACTCTGGAGTGGCATTGCTTGGCTGATTGGGATGACTGTATTCATTGCTTTGTTGTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTTTGTCTGTGAGCTTCCTCAGCATAATCTTGCTACCGATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTGGGTTCAGCAACTCAGATTGCCATGTTTGTGGTCCCTTTATGTGTGATCGTTGCTTGGATAATGGGTATCAAAATGGATTTGAACTTCAATATCCTAGAGACAGGTTCCGTTGCTTTGGCAATAATAGTCACAAGCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTATTCTCCTGCTGTGCTACATAATTATTGGAGCTTGCTTCTTCGTACAAAGAACACCCTTTAACCAAGGTGATGTTACAAACGTCATGCCTAAACCAGCCATTAATGCAGTTCTAAGTGCTTAG 1350 0.4444 MAASHQQEPWLLENGNPKVLTREMRHGRTAHSKSSNSLRKKSDRTLVSKVPCATLRNVLLNLQEVLLGTKLSILIPAIPAAIVAEYCGFGRPWVFLLSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNATELIIAIFALSSNKIAVVKFSLLGSILSNLLLVLGTSLLCGGIANVGVEQKYDRRQGDVNSLMLLLALLCYLLPMLFKYSAASAALTVDPSLYLSRASSIVMLIAYAVYIIFQLWTHRRLFEAEDEDEDDNNGSDEEAVIGLWSGIAWLIGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGIKMDLNFNILETGSVALAIIVTSFTLQDGTSHYMKGLILLLCYIIIGACFFVQRTPFNQGDVTNVMPKPAINAVLSA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1075 449 TIGRFAM cax: calcium/proton exchanger 75 423 IPR004798 GO:0006816|GO:0015369
Pvu8g1075 449 Gene3D - 122 277 IPR044880 -
Pvu8g1075 449 Pfam Sodium/calcium exchanger protein 281 418 IPR004837 GO:0016021|GO:0055085
Pvu8g1075 449 Pfam Sodium/calcium exchanger protein 93 250 IPR004837 GO:0016021|GO:0055085
Pvu8g1075 449 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu8g1075 449 TIGRFAM caca2: calcium/proton exchanger 57 423 - -
Pvu8g1075 449 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1075 Pvu-Chr8 11900393 11904283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1075 8 428 Antiporters AT2G38170 70.233 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1075 K07300 - gmx:100779440 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1075 8 11900393 11904283 Pvu8g1075 8 11900393 11904283 ECH
Pvu8g1075 8 11900393 11904283 Pvu10g0016 10 496423 500752 PCT