Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1047 ATGGCTGAGGTGGTGAAATCGGAGGAGTGTTGCCTGGAGAATAAGCAGTCTACTGCTGCTTCTTGCTCCTCTGTTTCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCTGGGATATGTAGCCCTGCATCCACATCACCTTCCCATCGGCGGACCACTGGTCCTATCAGGCGTGCTAAGGGTGGTTGGACAGCACAGGAGGATGAAACATTAAGGAATGCTGTGGCAGTTTTTAAGGGAAAAAGTTGGAAGAAAATAGCCGAGTTTTTTCCTGATAGGTCAGAAGTCCAGTGTTTGCATAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGACAAAATATGGGCCAACAAAATGGTCTTTGATAGCCCAGTCTTTACCCGGTCGAATAGGCAAACAATGTCGAGAGCGGTGGCACAATCATCTTAACCCTGAGATAAAGAAGGATGCCTGGACTTTGGAGGAGGAATTAGCCCTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCATGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCTTTGAAGAAAAAGTTAGATTTTTATTTAGCTACAGGAAGACTTCCACCAATTCCCAAGAATAGTCCACAAGTTACTGTCAAAGATACAATTAGACGTTCTGCTAGTAAATCAATACTTGTTTATTCAAATAAAGAATTAAATGCAGCTGTTGAAACATCATCTGAAACTACAGCCATAAGTAAGCTAGATGACAGTAGCAGGAATCAGTTTGAGTCCTCGGGAACAGTTAGAGAAGTTGGTGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGACTGTGTCGAATGCAAACCTGGATCTTCCAACATTGATCTTAGGTGTAGCAACTCAGAACAACTGTCAAAAGGTAATTGGGGAATAACTTATGGGCCAAGACCTGACAATTCCGGATTCAATGGACACTCCACTTTTGAGCATTGTACAAACAATGGTGACATGAGCACTACAAGCTTAATTGGAACATCTTTGCAAGAAAGTCCGACCTGTGGTTCTCTGTGTTATGAGCCACCACAGTTACATAGTTCAATTCCCATAGATTCTCTTTATTTAAATTATATCTGCCAGCAGAATGAGTTTTGTTCGACTCCAACTTTGTCACCTATTGGTTTCTTCACTCCACCTCGTGTGAAGGGTGATGAATTATGCACTGAGACACCTGAATCAATTTTGAAAAGGGCTGCCAATACTTTTCCAAATACTCCTTCCATATTGAGGAGGAGGAGAACTGAGGTTCAAGCACTCACTAGTCCTAGTAAAGTTTTGAAGGTAGATAAAGATCCACGTTCTTCTAATGAAACAGGGAGAACCAATGATGATTCTGGTTCTAGGCATTTCTCCAGGAGTCCGGCAAGCCATGGCAATGTGAATGACATTCCCAGTAATAAGACATTCAATGCATCTCCCCCATATAGGTTAAGATCCAAGCGAACTGGGATTGTCAAGTCAGTGGAGAAACAACTGGAGTTTGCTTTTGACAAAGAGAAGAATGATGACAAGAGAAGCAATGTCATGACTGAAGATTGTCTCCATGAAAAAAAATTGGTTGCCACATAG 1683 0.4177 MAEVVKSEECCLENKQSTAASCSSVSEGSGSAIHKSPGICSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVTKYGPTKWSLIAQSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIPKNSPQVTVKDTIRRSASKSILVYSNKELNAAVETSSETTAISKLDDSSRNQFESSGTVREVGDSSSVPANESADSDCVECKPGSSNIDLRCSNSEQLSKGNWGITYGPRPDNSGFNGHSTFEHCTNNGDMSTTSLIGTSLQESPTCGSLCYEPPQLHSSIPIDSLYLNYICQQNEFCSTPTLSPIGFFTPPRVKGDELCTETPESILKRAANTFPNTPSILRRRRTEVQALTSPSKVLKVDKDPRSSNETGRTNDDSGSRHFSRSPASHGNVNDIPSNKTFNASPPYRLRSKRTGIVKSVEKQLEFAFDKEKNDDKRSNVMTEDCLHEKKLVAT* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1047 560 MobiDBLite consensus disorder prediction 23 63 - -
Pvu8g1047 560 CDD SANT 166 209 IPR001005 -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 261 304 - -
Pvu8g1047 560 ProSiteProfiles Myb-like domain profile. 107 158 IPR001005 -
Pvu8g1047 560 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Pvu8g1047 560 ProSiteProfiles Myb-like domain profile. 55 106 IPR001005 -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 486 513 - -
Pvu8g1047 560 CDD SANT 63 106 IPR001005 -
Pvu8g1047 560 SUPERFAMILY Homeodomain-like 109 205 IPR009057 -
Pvu8g1047 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 162 IPR017930 -
Pvu8g1047 560 PANTHER MYB PROTEIN-RELATED 19 314 - -
Pvu8g1047 560 PANTHER MYB PROTEIN-RELATED 368 484 - -
Pvu8g1047 560 Gene3D - 165 230 - -
Pvu8g1047 560 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
Pvu8g1047 560 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Pvu8g1047 560 Pfam Myb-like DNA-binding domain 60 106 IPR001005 -
Pvu8g1047 560 CDD SANT 114 158 IPR001005 -
Pvu8g1047 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 106 IPR017930 -
Pvu8g1047 560 Gene3D - 59 111 - -
Pvu8g1047 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 213 IPR017930 -
Pvu8g1047 560 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 261 298 - -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 464 485 - -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 443 459 - -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 38 52 - -
Pvu8g1047 560 Gene3D - 112 163 - -
Pvu8g1047 560 MobiDBLite consensus disorder prediction 443 513 - -
Pvu8g1047 560 SMART sant 59 108 IPR001005 -
Pvu8g1047 560 SMART sant 111 160 IPR001005 -
Pvu8g1047 560 SMART sant 163 211 IPR001005 -
Pvu8g1047 560 PANTHER MYB-RELATED PROTEIN B-LIKE 368 484 - -
Pvu8g1047 560 PANTHER MYB-RELATED PROTEIN B-LIKE 19 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1047 Pvu-Chr8 11154605 11164689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1047 5 552 MYB Transcription Factor Family AT3G09370 47.928 2.83e-154 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu8g1047 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1047 K09422 - gmx:778081 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1047 8 11154605 11164689 Pvu10g0128 10 1922595 1927038 PCT