Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1042 ATGGGTGTAGATTTCCAAACGGGCTTATTTAGCTTAAGAAAAATCAAAGCTGCAACTAAAAACTTTGATTTTAGCTTCAAGATTGGAGAAGGAGGTTTTGGTCCTGTATACAAGGAAAAATCTGAATTGAAGCTGAATTGGTCAACAAGGCAAAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACATCCATGGAGAGTCAAGGCTAAAGATAGTTCACAGAGACATCAAGGCCACTAATGTGTTACTAGACAAAGATCTCAACCCAAAGATATCTGATTTTGGTTTGGACAAACTTGATGAAGAGGGCAACACACACATAACTACCAGAGTAGCTGGCACCTATGGATACATGGGTCCAGAATATGCAGTGCATGGTTATTTAACTGATATAGCAGATGTGTATAGTTTT 414 0.3865 MGVDFQTGLFSLRKIKAATKNFDFSFKIGEGGFGPVYKEKSELKLNWSTRQKICVGIARGLAYIHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLDKLDEEGNTHITTRVAGTYGYMGPEYAVHGYLTDIADVYSF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1042 138 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 138 - -
Pvu8g1042 138 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 38 - -
Pvu8g1042 138 Pfam Protein kinase domain 47 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1042 138 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 42 138 - -
Pvu8g1042 138 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 38 - -
Pvu8g1042 138 SUPERFAMILY Protein kinase-like (PK-like) 8 138 IPR011009 -
Pvu8g1042 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Pvu8g1042 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1042 138 Gene3D Transferase(Phosphotransferase) domain 1 36 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1042 Pvu-Chr8 11100262 11100721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1042 2 40 Receptor kinase-like Gene Family AT1G53420 58.974 8.60e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g1042 Pkinase 4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1042 - - pvu:PHAVU_008G101500g 283.878