Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1040 ATGGGTAACCGAATCAGCAATTTCTGCCTCTGTTCCTCCGGCGACGCCTCCGGAAGGTTCGAGAACAGAGCTTCCTTCCTCTCCAAGCAACACCAGAATTCCCTCGGAAACTCTATTTGCTATGTGAGACCCGACACGTGTCGGTTCTCCAGCGAGGCGTTTTCTGACGATGATGACACCTTCATGACTTTCCGGTCGGTTTCCGGTGCTACCGTGAGTGCAAACACGTCGGCGACGCCTTCAACTTCGCTCGATGATTCGCTTCAACACAGCACCGTTTTGGATTCCTCTGCCTCGTTTGAGAGCTCTGGCTCCTTCACTTACACCTTGGTCCCTTTTCAGCATCAACACGTTCATCGTGGATTCTCTCTGGGAGGGTGTTCGGAAAGAGGGTTTTATTGGGGTCCTCGTGATCGTGTGCTGAACGATGAAGGGTCCATCGAGAAAGGTTCTTCTGAGGTAGCAATGAATAAAGGGAAGGGAAGTAAAAGACATTTGAAAAAGGTTCTGAGTAAGATTTCCATCGGGGGAAAGTCTATTTTCAAGAATAATGATAATACTAATGCGAGAGTGAGTTGTAGTACTAGTTTGAGTGCTGAGACGAGTTTGCATGGTGTTGAGGTTGATGACTACTTGGATAGTGATGTGTTGATGGGGTGTGAGAATCTTCATTGGGCTCAAGGGAGAGCTGGTGAAGATCGTTTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGTCCTGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCTGTGAATGATGAGCTCAAGGAGATGTTGTGTGGACACAACAAGTTTGAGCTCAAGGATTCAGACTCTTTGGAGTTGAGGGAGGGAGTGGTTGATGGTTGTTCTTCAGGTCATAATAGAGAAAATTATCCAATAGAAAACGGAGAGTTAAATTTGGAATGTGTGTCAGAAGGAGTAGAGCGAATGAATGGGACGAATATTGAAAGAGTGGATTTGAGTCACTCAGATGTGTTACAAGCTCTTTCAGAGTCCTTGAGGAAGACTGAGGATTCATTCATGAGGACTGCTGAAGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGCCGTGCTGTGTTGGCCACTCACAGTGGGGAATCACTTCAGCTCACCATGGACCATAGCACTCAAGTGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCATCCTGATGACCCTTTAGCAGTAACTAGAGGCCGGGTGAAGGGTCGCTTGAGTGTCACAAGGGCTTTTGGGGCAGGCTTCCTTAAGCAGCCTAAGCAAAACAATGCAGTATTAGAGAGTTTCAGAGTGAGTTACATAGGAGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGCTCAATTCAAATGACAAGTTCCTCATGCTGTCTTCAGATGGACTTTACCAATATTTCACCAATGAAGAAGCAGCTGCAAAAGTTGAGTCATTCATCACCATGTTTCCTGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCACTAGGTCGAGCAGCAAAAAGGGCTGGTTTGGAGTTCCATGAGCTGCTTGATATTCCACAAGGGGAACGCCGTCATTACCATGATGACATTTCTATTGTCATAATCTCCTTAGAGGGAAAAATATGGCGTTCATTAGTGTAA 1767 0.4533 MGNRISNFCLCSSGDASGRFENRASFLSKQHQNSLGNSICYVRPDTCRFSSEAFSDDDDTFMTFRSVSGATVSANTSATPSTSLDDSLQHSTVLDSSASFESSGSFTYTLVPFQHQHVHRGFSLGGCSERGFYWGPRDRVLNDEGSIEKGSSEVAMNKGKGSKRHLKKVLSKISIGGKSIFKNNDNTNARVSCSTSLSAETSLHGVEVDDYLDSDVLMGCENLHWAQGRAGEDRLHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCGHNKFELKDSDSLELREGVVDGCSSGHNRENYPIENGELNLECVSEGVERMNGTNIERVDLSHSDVLQALSESLRKTEDSFMRTAEEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATHSGESLQLTMDHSTQVKEEVYRIRREHPDDPLAVTRGRVKGRLSVTRAFGAGFLKQPKQNNAVLESFRVSYIGESPYITCFPSLHHHKLNSNDKFLMLSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALGRAAKRAGLEFHELLDIPQGERRHYHDDISIVIISLEGKIWRSLV* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1040 588 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 16 588 - -
Pvu8g1040 588 CDD PP2Cc 230 579 IPR001932 -
Pvu8g1040 588 PANTHER PROTEIN PHOSPHATASE 2C 16 588 IPR015655 GO:0004722|GO:0006470
Pvu8g1040 588 Gene3D - 191 585 IPR036457 -
Pvu8g1040 588 Pfam Protein phosphatase 2C 338 545 IPR001932 -
Pvu8g1040 588 ProSiteProfiles PPM-type phosphatase domain profile. 217 579 IPR001932 -
Pvu8g1040 588 SUPERFAMILY PP2C-like 229 580 IPR036457 -
Pvu8g1040 588 SMART PP2C_4 216 577 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1040 Pvu-Chr8 11085866 11088792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1040 1 588 PP2C-type Phosphatase Gene Family AT1G07630 46.154 1.40e-176 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1040 - K01102 gmx:100794388 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1040 8 11085866 11088792 Pvu8g1040 8 11085866 11088792 ECH