Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1035 ATGTCCCCAGCAGGTTCTTCAAGATGGAGCCCTACCACAGAACAACTCATGATCTTAGAGGAACTCTACAGGAGTGGCATTAGAACTCCTAGTGCCTCTCAAATTCAGCAAATAACGACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCAGCAAGCAACTGCAGCTACAGCAACAACAACTCCAAGTCCATCATTGCCAACTCAATCCTGATATCCCTAACCATTATGTTGGCACCTTTGGCTATACTCCTTGTTCTTCAACCCCGGATTTTCCCTTTTATAACCCACCTACCTTTCTTTATCAGGGAGGATCTTCAAACACATCTGAACAGGCATTGAATTGCGCATGGAATGTGCACAACCTGCAAAGTAATCTGGCGGAGAAGGAAGAGGTGACCTTCTACAACAATGGTTGGAGTACACCAGTGGATGTTAACAACCAAGAATCTTCATCATGTTGCACTTCTCGACCTCTCAAGACCCTTGATCTCTTTCCACTCACAACCACCAGAACCAATGAAGACTGCACCACTCCACCCAAGTAG 612 0.451 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLSKQLQLQQQQLQVHHCQLNPDIPNHYVGTFGYTPCSSTPDFPFYNPPTFLYQGGSSNTSEQALNCAWNVHNLQSNLAEKEEVTFYNNGWSTPVDVNNQESSSCCTSRPLKTLDLFPLTTTRTNEDCTTPPK* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1035 203 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 200 - -
Pvu8g1035 203 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Pvu8g1035 203 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Pvu8g1035 203 Gene3D - 3 67 - -
Pvu8g1035 203 CDD homeodomain 8 67 IPR001356 GO:0003677
Pvu8g1035 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 200 IPR044555 GO:0003700|GO:0099402
Pvu8g1035 203 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Pvu8g1035 203 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1035 Pvu-Chr8 10997775 10998880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1035 1 74 Wox Gene Family AT2G28610 83.784 1.69e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu8g1035 Homeodomain 6.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1035 - - gmx:102662354 287.345