Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1012 ATGACCACCAGCATGAAGGTGCATCACTTCACACGTGCATTCTGGGAGCACGAACCTTTCCTCACCCTTGGCTGCAACCGATTACGCCCTCTTGCTCCCAAGCTTCCCAGCCTCCACACCACCACCACCCCTTCTCTTCCTTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTGGTCCCAGAAAACTAGTTTCCTTAATCCACAATAACAAGGATCCACCTTCACCCCAAGCCCAGGTTGAAACGCTTCCAGGAGGGACGCGGTGGAATCCGACGCAAGAACAGATAGGTATATTGGAGATGCTGTACAAAGGAGGGACGAGAACTCCAAATGCTCAGCAGATAGAGCAAATCACGGTTCAGCTAGGAAAGTACGGAAAGATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCACGCGAGAGACAAAAGCAGAAGCGTAACAGCCTTGCCTTTTCTCATAGTCCTCGAACTCCCACAATTCATACTGTTGTTACTTTAGAGACAGCAAGGGGGGAAGTAGTGGACAGAGATGAGGAGGAAGGTAGTCCGTGTAAAAAGAAGTGTAGGAGATGGGTATTTGATTGTTTGGAAGAGCAAAGCATGTCATCATCATCACTGTGTGAAGAGGAGGAACATAGAACTCTGGAGCTTTTTCCATTGCAGCCGGAAGGAAGATTAAGGGGTTTGAGAAACTGA 708 0.4774 MTTSMKVHHFTRAFWEHEPFLTLGCNRLRPLAPKLPSLHTTTTPSLPFDLKSFIRPESGPRKLVSLIHNNKDPPSPQAQVETLPGGTRWNPTQEQIGILEMLYKGGTRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLAFSHSPRTPTIHTVVTLETARGEVVDRDEEEGSPCKKKCRRWVFDCLEEQSMSSSSLCEEEEHRTLELFPLQPEGRLRGLRN* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1012 235 MobiDBLite consensus disorder prediction 67 90 - -
Pvu8g1012 235 SMART HOX_1 84 151 IPR001356 GO:0003677
Pvu8g1012 235 SUPERFAMILY Homeodomain-like 85 154 IPR009057 -
Pvu8g1012 235 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 229 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pvu8g1012 235 CDD homeodomain 87 148 IPR001356 GO:0003677
Pvu8g1012 235 Gene3D - 87 152 - -
Pvu8g1012 235 Pfam Homeodomain 87 146 IPR001356 GO:0003677
Pvu8g1012 235 MobiDBLite consensus disorder prediction 70 90 - -
Pvu8g1012 235 ProSiteProfiles 'Homeobox' domain profile. 92 147 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1012 Pvu-Chr8 10452072 10453553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1012 5 153 Wox Gene Family AT1G46480 63.580 1.64e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu8g1012 Homeodomain 8.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1012 - - gmx:100781015 374.015