Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1008 ATGGGAAACTGCTGCAGATCCCCGGCCGCCGTGGCCCGCGAGGACGTCAAATCGAGCTTCTCCAACGCAGACCACCATGGCAAGCGTGGTTCCGGCGCTGAAGCTGTCAAACAGAAGGCGCCGATCACGGTACTCGCCGGTGTGCCCAAGGAGAACATCGAGGACCGCTACCTCGTCGACCGCGAGCTCGGCCGCGGGGAGTTCGGCGTGACTTACCTCTGCATCGACCGCGACACGCGCGAGCTGCTCGCGTGCAAAAGCATATCCAAGAGGAAGCTCAGGACTGCCGTCGACGTCGAGGACGTCCGCCGCGAGGTAGCCATCATGCGACACCTGCCTGAGAGCCCCAGCATCGTGTCACTCCGCGAAGCCTGTGAGGACGACAATGCGGTTCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGGATCGTCGCTCGCGGTCACTACACCGAGCGCGCTGCTGCCGCTGTCACTAGGACGATTGTGGAGGTCGTGCAGCTCTGCCACAAGCACGGGGTCATCCACCGCGACCTGAAACCGGAGAATTTCTTGTTTGCAAACAAGAAGGAGAATTCGCCGCTCAAAGCTATTGACTTCGGGCTTTCCATATTCTTCAAGCCAGGCGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCGCCAGAAGTTCTCAAGCGGAATTATGGACCAGAAATAGATATATGGAGTGCAGGAGTAATTCTCTACATCTTACTGTGTGGTGTTCCCCCGTTTTGGGCTGAATCTGAGCAAGGAGTTGCACAGGCCATTCTTCGAGGACTTATAGATTTCAAAAGGGAACCTTGGCCAAGTATTTCTGAAGGTGCTAAAAGTCTTGTTAGGCAAATGTTAGAACCAGACCCTAAGCTTCGATTAACTGCCAAACAAGTGCTTGAGCATCCCTGGCTCCAAAATGCTAAGAAGGCTCCTAATGTTCCACTTGGAGATGTTGTCAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATCAAAGATATGTTCAAGAAGATGGATAATGATAATGACGGCATTGTTTCCATAGAAGAACTGAAAGCTGGATTTCGAAACTTTGGGTCTCAACTTGCTGAGTCTGAAATTCAGTTGCTTATTGAAGCTGTAGATAGTAATGGTAAGGGAACGCTAGACTACGGAGAATTTGTTGCTGTTTCCCTTCATTTAAAAAGGATGGCTAATGACGAGCATCTTCGTAAGGCCTTCTCCTATTTTGACAAAGATGGGAATGGATATATTGAACCAGATGAGCTACGGAATGCCTTGATGGAAGATGGAGCAGATGATTGTACAGATGTAGCAAATGATATTTTCCTAGAAGTAGACACGGATAAGGATGGACGTATCAGCTACGATGAATTTGTTGCTATGATGAAAACTGGAACGGATTGGAGAAAGGCATCAAGGCATTATTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTGATGAAAGACGGTTCTTTAAACTTAGGAAATGAGTAG 1596 0.4881 MGNCCRSPAAVAREDVKSSFSNADHHGKRGSGAEAVKQKAPITVLAGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPESPSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISEGAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDNDNDGIVSIEELKAGFRNFGSQLAESEIQLLIEAVDSNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALMEDGADDCTDVANDIFLEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1008 531 MobiDBLite consensus disorder prediction 18 33 - -
Pvu8g1008 531 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Pvu8g1008 531 SUPERFAMILY Protein kinase-like (PK-like) 46 340 IPR011009 -
Pvu8g1008 531 CDD EFh 434 496 IPR002048 GO:0005509
Pvu8g1008 531 MobiDBLite consensus disorder prediction 16 35 - -
Pvu8g1008 531 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 5 512 - -
Pvu8g1008 531 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Pvu8g1008 531 Pfam EF-hand domain pair 433 496 IPR002048 GO:0005509
Pvu8g1008 531 Pfam EF-hand domain pair 361 421 IPR002048 GO:0005509
Pvu8g1008 531 SMART efh_1 434 462 IPR002048 GO:0005509
Pvu8g1008 531 SMART efh_1 362 390 IPR002048 GO:0005509
Pvu8g1008 531 SMART efh_1 398 426 IPR002048 GO:0005509
Pvu8g1008 531 SMART efh_1 470 498 IPR002048 GO:0005509
Pvu8g1008 531 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Pvu8g1008 531 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Pvu8g1008 531 SUPERFAMILY EF-hand 344 522 IPR011992 -
Pvu8g1008 531 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Pvu8g1008 531 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1008 531 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Pvu8g1008 531 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1008 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Pvu8g1008 531 Gene3D - 324 499 - -
Pvu8g1008 531 CDD STKc_CAMK 56 314 - -
Pvu8g1008 531 Pfam Protein kinase domain 59 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g1008 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 512 - -
Pvu8g1008 531 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Pvu8g1008 531 Gene3D Transferase(Phosphotransferase) domain 1 143 323 - -
Pvu8g1008 531 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Pvu8g1008 531 Gene3D Phosphorylase Kinase; domain 1 58 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1008 Pvu-Chr8 10383908 10392491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1008 1 528 EF-hand Containing Proteins AT1G74740 69.101 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu8g1008 Pkinase 1.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1008 K13412 - gmx:100783922 1025