Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1007 ATGGAGGGTCATCATCTCCATCACCATCACCATCACCGGCAGCAGCAACATCAACAGCAACATCAACAGCAACAGCAGCATCACCACCCTCACAACATCACAACCAGTGCTAACGTGGATGCCACGGATAGGTTTCCCCAATGGAGCATCCAGGAGACAAAAGAGTTCCTCGTGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGGTGTGAAGCGATAGAGACAGAGGCGATGAGGCAGCAGTTCCCGTTTTACAATGAGCTTCAAGGGATTTTCACATCAAGGATGCAGAGAATGTTGTGGGCAGAAGCAGAAGGAGGGTCGAAGAAGAAGGGGGTGCAGCTTTCATCGGAGGATGAGGAAGAGGGAAATGAAGAGAGTGAGGGAGATCAGAAGGGTAGCATGATGAAAAAGAAGAAGAAGGGGAAGATGGTAATTGGAGGTGGTAGCAGTAGCAATATGGAGAGTTTGAAGGAGATAATGGAGGAGTTCATGAGGCAACAGATGCAGATGGAGGCACAGTGGATGGAGGCGTTTGAGGCGAGGGAGAATGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATGATGATGGACCAGAGATGGAGAGAGAGGGAAGATCAAAGAAGGATTAGGGAAGAAGTTAGGGCTGACAAGAGAGATGCTCTAATCACAGCTCTTCTCAACAAGCTCAGAAGAGAAGAGATGTAG 858 0.4895 MEGHHLHHHHHHRQQQHQQQHQQQQQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCEAIETEAMRQQFPFYNELQGIFTSRMQRMLWAEAEGGSKKKGVQLSSEDEEEGNEESEGDQKGSMMKKKKKGKMVIGGGSSSNMESLKEIMEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQRWREREDQRRIREEVRADKRDALITALLNKLRREEM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1007 285 Coils Coil 194 214 - -
Pvu8g1007 285 MobiDBLite consensus disorder prediction 1 30 - -
Pvu8g1007 285 CDD GT1 46 111 - -
Pvu8g1007 285 Pfam Myb/SANT-like DNA-binding domain 47 129 IPR044822 -
Pvu8g1007 285 ProSiteProfiles Myb-like domain profile. 48 104 IPR001005 -
Pvu8g1007 285 MobiDBLite consensus disorder prediction 147 192 - -
Pvu8g1007 285 PANTHER - 1 283 - -
Pvu8g1007 285 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 283 - -
Pvu8g1007 285 Gene3D - 48 109 - -
Pvu8g1007 285 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1007 Pvu-Chr8 10351935 10354490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1007 28 283 Trihelix Transcription Factor Family AT2G38250 52.555 1.05e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu8g1007 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1007 - - gmx:100794230 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1007 8 10351935 10354490 Pvu8g1007 8 10351935 10354490 ECH