Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0977 ATGAGGACCCGTTTAGCCTCCACGCGGGTCATCATCATCGCCTCTCTCTGTTTCCTTGCGAGCATGAAATTGGAAGCCAAAACCACCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGGGAAATTCAGAAGGCTTTCCACAAGCTATCTCTCCAGTATCACCCTGACAAGAACAAAGCCAAGAGTGCGCAAGAGAAGTTTTCTCAGATCAATAATGCGTATGAAATTTTATCCGATGAAGAGAAGAGAAAGAAATATGACATGTATGGAGATTTAAATGACAATCCTGGATTTCAAGGTGGCCATCCTGGATTTCAAGGTGGCGGCCATCCTGGATTTCAAGGTGGCCATCCTGGAGGTAGGGGTGGATATACTTATTTTACAGGGGGTGACTGGCAGGGAGGATCTAAGTCATTCTCCTTTTCCTCTGGCGGCTCGGGTGGTTCAAATTCTTTTGGGATTGGCTTGGATAATATTTTTGGCAGTATTTTTGGTGGTGGAGGTGGTGGGAATATGTTTGGTGGTGGAGGTGGTGGGAGTATGTTTGGTGGTTTTGGCAGTTCAGCTAATACTGAACGGGCGTCCTCAGTTTCTCCCCAACGTCTTACATCAATAAATTCACATATCTACAAGAAAGAGATAGAAAATGCAGGGATGACTTGGATTTTGTTGTCTTATAGACCTACGAGTGCATCGAAGCATGTCCAATACTTTGAATCCACTATAGAGGAGGTTGCCAGTTCATTACAGGGAGCTGTGAAGGCTGGAAGCATTAACTGTGATAAGGAAGTCTCATTCTGTAAAGAGCTTGGCATATATCCACACAAAGCTCCTAGAATTTTTGTTTTTTCATACAAGGAGAATGGAATTGGTTCTTTGGTGGAGTACAGTGGACACTTGGCTGCTAAGAATTTGAAGGCTTTCATTCAAGAACACTTGCCAAGGTTTTCCAAGCGAACCAACTTGAATAGTCTTGACCAATTCGGCACTACGGCAAAGTTGCCTAGGGTGCTGCTTCTCTCCACTAAGAAGGACACTCCAGTAATTTGGCGTGTTCTTAGTGGCTTGTATCACAAACGCATTACTCTCAGTGATGCAGAGGTGCATGATGTTTCTGATCCAAGAGTAAAAAATCTAGGAGTTGATGCACTTCCATCGATTGTAGGTTGGCTACCTAATGGAGAAAAACGTGTTCTGAAAACTGGGATTTCTGTAAAAGATTTAAAATCGGCAATTCTCGGTCTTAGTAAAATACTTGATAATTTTGAAGAATCAAGTAAAAAGCAAGCATCAGGTCAGGCCAAGAAGGCACAAACTGATCCAGACGACGGACGCATACCATTGCTTTCTCAATCAAACTTTGAGGCTCTCTGTGGTGCGAGAGCTCCTGTCTGCATAATTGGTGCCTTCAGATCTTCCAAAGCCAGAGAAAAGCTAGAATCAATCCTCTCTTTGGTCTCCCAAAAATCTTTGTCAAGACGACCAAATGGTGGAAGCAGCAGCTCTAGGGACTCCATTTCTTATGCCCTTTTAGATGCTGCAAAGCAACAGTCATTTCTAAATGCATTTGAGAAAACAGGTTATAAATCATCAAATAAGTTGTTGATTGCTTACAAACCTCGTAGAGGAAAGTTCAGTGTATTTAGGGGTGAAATGACAATGGAGGAAGTAGAAAGTTTCATTGGCTCCGTTCTGAGTGGAGATATATCCTTCACAGAAACGCGTTGGAAACCTGTACTAGAGCATTAG 1761 0.4304 MRTRLASTRVIIIASLCFLASMKLEAKTTDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKSAQEKFSQINNAYEILSDEEKRKKYDMYGDLNDNPGFQGGHPGFQGGGHPGFQGGHPGGRGGYTYFTGGDWQGGSKSFSFSSGGSGGSNSFGIGLDNIFGSIFGGGGGGNMFGGGGGGSMFGGFGSSANTERASSVSPQRLTSINSHIYKKEIENAGMTWILLSYRPTSASKHVQYFESTIEEVASSLQGAVKAGSINCDKEVSFCKELGIYPHKAPRIFVFSYKENGIGSLVEYSGHLAAKNLKAFIQEHLPRFSKRTNLNSLDQFGTTAKLPRVLLLSTKKDTPVIWRVLSGLYHKRITLSDAEVHDVSDPRVKNLGVDALPSIVGWLPNGEKRVLKTGISVKDLKSAILGLSKILDNFEESSKKQASGQAKKAQTDPDDGRIPLLSQSNFEALCGARAPVCIIGAFRSSKAREKLESILSLVSQKSLSRRPNGGSSSSRDSISYALLDAAKQQSFLNAFEKTGYKSSNKLLIAYKPRRGKFSVFRGEMTMEEVESFIGSVLSGDISFTETRWKPVLEH* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0977 586 SMART dnaj_3 29 86 IPR001623 -
Pvu8g0977 586 MobiDBLite consensus disorder prediction 102 124 - -
Pvu8g0977 586 PRINTS DnaJ domain signature 32 50 IPR001623 -
Pvu8g0977 586 PRINTS DnaJ domain signature 50 65 IPR001623 -
Pvu8g0977 586 PRINTS DnaJ domain signature 66 86 IPR001623 -
Pvu8g0977 586 PRINTS DnaJ domain signature 86 105 IPR001623 -
Pvu8g0977 586 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Pvu8g0977 586 Gene3D DnaJ domain 27 178 IPR036869 -
Pvu8g0977 586 Coils Coil 64 84 - -
Pvu8g0977 586 ProSiteProfiles dnaJ domain profile. 30 94 IPR001623 -
Pvu8g0977 586 PANTHER DNAJ PROTEIN ERDJ3A 6 585 - -
Pvu8g0977 586 CDD PDI_a_family 242 313 - -
Pvu8g0977 586 Gene3D Glutaredoxin 207 318 - -
Pvu8g0977 586 CDD DnaJ 30 83 IPR001623 -
Pvu8g0977 586 SUPERFAMILY Chaperone J-domain 26 128 IPR036869 -
Pvu8g0977 586 SUPERFAMILY Thioredoxin-like 203 318 IPR036249 -
Pvu8g0977 586 PANTHER DNAJ PROTEIN ERDJ3A 6 585 - -
Pvu8g0977 586 Pfam DnaJ domain 30 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0977 Pvu-Chr8 9892362 9895759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0977 32 93 C2H2 Transcription Factor Family AT1G74250 41.176 2.68e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0977 - - gmx:100796871 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0977 8 9892362 9895759 Pvu8g0977 8 9892362 9895759 ECH