Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0969 ATGGAGTGCATCAGCCCTACCTCTTGTGAAGGGTCATCATCCAAGAACAAGATCAGCAAGGAGAAAAAGGGTGTGAAGAAAGGCAACAAGGGAGGGGTGAAGCTTTCCACTGATCCACAAAGCGTGGCAGCCAGAGAAAGAAGGCACAGAATCAGTGACAGGTTTAAGATCCTTCAGAGCATGGTCCCGGGTGGGAGCAAGATGGACACAGTGTCCATGTTGGAGGGAGCCATTCACTACGTCAAGTTCCTCAAATCCCAGATTTGGCTCCACCAAGCATTGATAAACTTTCTAGATATTGATCATCATGAAGCTCCCGTGCACCTCCCTGCAGAGTATAATCTCCCTCATGAACATTCCATTTCTCTTCAGCAAAACCCTTCTTCAGTTTCGGTGCATTCTCAGCTGAGTCTACCACAGCCACCACTAGCACAGTGCTGCTTCCAAGGTGAAGAAGATTGTAACACCTTTGATGCCACTATGAAATATTGGCCAGCTTAG 501 0.477 MECISPTSCEGSSSKNKISKEKKGVKKGNKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEGAIHYVKFLKSQIWLHQALINFLDIDHHEAPVHLPAEYNLPHEHSISLQQNPSSVSVHSQLSLPQPPLAQCCFQGEEDCNTFDATMKYWPA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0969 166 CDD bHLH_AtIND_like 36 95 - -
Pvu8g0969 166 Gene3D - 40 92 IPR036638 GO:0046983
Pvu8g0969 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 100 IPR036638 GO:0046983
Pvu8g0969 166 MobiDBLite consensus disorder prediction 1 47 - -
Pvu8g0969 166 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Pvu8g0969 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Pvu8g0969 166 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 14 153 IPR045843 GO:0003700|GO:0006355
Pvu8g0969 166 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 14 153 - -
Pvu8g0969 166 SMART finulus 41 90 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0969 Pvu-Chr8 9818538 9819038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0969 25 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 44.954 2.05e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu8g0969 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0969 - - gmx:113000114 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0969 8 9818538 9819038 Pvu8g0969 8 9818538 9819038 ECH
Pvu8g0969 8 9818538 9819038 Pvu10g0762 10 22153698 22154300 PCT