Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0967 ATGACTACTACCTTGGCTTACCAAGAACACCTTCCTGCAGCACCCGAATGGCTGAACAAAGGGGACAACGCTTGGCAGTTAACAGCAGCAACTCTTGTTGGTCTACAGAGCATGCCTGGTCTTGTGATTCTCTATGCCAGCATAGTGAAGAAAAAATGGGCTGTTAATTCAGCTTTCATGGCTCTCTATGCCTTTGCAGCAGTTCTCCTATGTTGGGTGCTTGTGTGTTACCGGATGGCCTTTGGGGAGAAACTTTTCCCCTTCTGGGGTAAGGGTGCCCCAGCACTAGGCCAAAAGTTTCTTACAAAACGAGCCATAGTTCCTGAAACCATCCATCGCTTTGATAATGGGACTGTTGAGAGCCCTGCTGAAGAACCCTTTTACCCCATGGCCTCACTTGTCTATTTCCAATTCACTTTTGCTGCTATTACTCTCATCTTGTTGGCTGGCTCTGTCCTTGGTCGAATGAACATCAAGGCATGGATGGCTTTTGTGCCTCTTTGGCTAATCTTTTCTTATACTGTTGGGGCTTTCAGTCTCTGGGGTGGCGGCTTTCTCTACCAATGGGGTGTCATAGATTACTCTGGTGGCTATGTCATCCACCTTTCCTCTGGAATCGCTGGTTTAACTGCTGCTTATTGGGTTGGACCAAGGTTGAAGAGTGATAGGGAGAGGTTTCCACCAAACAATGTGCTGCTCATGCTTGCAGGTGCAGGGTTGTTGTGGATGGGGTGGTCAGGGTTCAATGGTGGAGCACCATATGCTGCAAATCTTACATCTTCAGTTGCAGTGCTGAACACAAACATTTGTGCAGCCACAAGTCTCCTTGTATGGACAACTTTGGATGTCATTTTCTTCGGGAAACCTTCTGTGATTGGAGCTGTGCAGGGCATGATGACTGGACTTGTATGCATCACACCAGGAGCAGGGCTTGTGCAATCGTGGGCTGCTATAGTGATGGGAATATCATCTGGGAGCATTCCATGGGTCACCATGATGATTTTGCATAAAAAGTCAACCTTGTTGCAAAAGGTGGATGACACCCTTGGTGTGTTTCACACTCATGCCGTGGCGGGGCTTTTGGGTGGTCTCCTCACAGGTCTCTTTGCAGAACCAGTTCTGTGTAGGTTACTATTGCCAGTTTCCAACTCAAGGGGTGCATTCTATGGTGGAGATGGTGGCATGCAACTCGTGAAGCAACTAGTGGCAGCCATGTTTGTGATTGGATGGAACTTGGTCTCCACCACTATCATTCTTCTTTTCATACGATTGTTCATACCATTGAGGATGCCGGACGAGCAGCTGGAGATCGGCGACGACGCCGTCCACGGCGAGGAAGCCTATGCCCTGTGGGGTGATGGAGAAAGATATGACCCAACTAGGCATGGCTCCTTGCACCCTTCCAACTCTGCTGTATCACCTTATGTCAATGGTGCAAGAGGGGTGACTATAAACTTATGA 1461 0.486 MTTTLAYQEHLPAAPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLVCYRMAFGEKLFPFWGKGAPALGQKFLTKRAIVPETIHRFDNGTVESPAEEPFYPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLTSSVAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGISSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPVLCRLLLPVSNSRGAFYGGDGGMQLVKQLVAAMFVIGWNLVSTTIILLFIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGERYDPTRHGSLHPSNSAVSPYVNGARGVTINL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0967 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pvu8g0967 486 SUPERFAMILY Ammonium transporter 17 430 - -
Pvu8g0967 486 TIGRFAM amt: ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu8g0967 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005887
Pvu8g0967 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005887
Pvu8g0967 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005887
Pvu8g0967 486 PANTHER AMMONIUM TRANSPORTER MEP2 1 483 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu8g0967 486 Gene3D Ammonium transporter AmtB like domains 2 451 IPR029020 -
Pvu8g0967 486 PANTHER AMMONIUM TRANSPORTER 1 483 - -
Pvu8g0967 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0967 Pvu-Chr8 9804259 9808746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0967 130 486 Inorganic Solute Cotransporters AT2G38290 78.830 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0967 K03320 - gmx:100790119 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0967 8 9804259 9808746 Pvu8g0967 8 9804259 9808746 ECH
Pvu8g0967 8 9804259 9808746 Pvu10g0765 10 22640485 22647635 PCT