Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0966 ATGGTAATGAGGATGGAAGAAGAGAGACACGTGTCCGAATGTTCCAAGACAAGCCCTTCTAACGAAGAAGTTTGTGAAGAAAGTGATGAGGAGAATGAAGATGGGAGTAAGCGGAACAACAATGGAGGAAGCTCGAGCAACAGCACCGTGGAAGAGAACGAGAAGAAGGCAACAGTGAGGCCTTATGTTAGATCCAAGTTGCCTAGGCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTGGGAGGACAAGAGAGAGCAACCCCAAAGTTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTGGAGGCAAATCAAGTATTGGGTGATCCTAGGCTCCTTGTAGAAACTGGAGACAGAAACGTTTACAATCTTAGCCAAATTCCCATGCTTCAAGGCTACAATCCAAGCCAAACTTCAACATTCAGATATGGATATGGGGATGCTTCTCTTGCTATCTATGAAAACATGGTGAAAAGGCCTTGCCCGAATAGGAGTTCAGCAGATGAACCTGGAGCTGAATTTTGTGGCAGCAAATTGACTGAGAGGACTCATGGGACCAATAGTAACATCAATTGGAGCCATAACATGCTCCAAGTTGATTGTTCCAGTTTTAATGAACCATCAACAAATAAAGTCCACGAACCAAAACACAAGTTCTTCTCGATTGGTGGCAATGAATCCTTATGCACACAAATCAAAATGAGCCAAGATGATCTACATCAAATGCAGCCAAGTGCACAAGAGCTCATGCCAAACAATAAGATGACTGCAAATCAGATGGAACTAAACAGCTTAAAAAGGAAGGCTTCAGATACTGACATTGATTTGAATCTGTCACTTAAATTAAGTTCAAGGATCAGTGGTGATGACCGGGGAAGCATGGTGGACCATGAAATTGATAGCAATCTATCACTGTCTTTGTGTTCTCAATCCTCCTCCTCCTATCTTAGCAGTAGGTTGAGAAAATCACAAGATCATTCTAAGGAGCAAGGGGAAAGAGCCAGAACATTGGATCTCACTATATGA 1095 0.4237 MVMRMEEERHVSECSKTSPSNEEVCEESDEENEDGSKRNNNGGSSSNSTVEENEKKATVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVEANQVLGDPRLLVETGDRNVYNLSQIPMLQGYNPSQTSTFRYGYGDASLAIYENMVKRPCPNRSSADEPGAEFCGSKLTERTHGTNSNINWSHNMLQVDCSSFNEPSTNKVHEPKHKFFSIGGNESLCTQIKMSQDDLHQMQPSAQELMPNNKMTANQMELNSLKRKASDTDIDLNLSLKLSSRISGDDRGSMVDHEIDSNLSLSLCSQSSSSYLSSRLRKSQDHSKEQGERARTLDLTI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0966 364 Pfam Myb-like DNA-binding domain 70 120 IPR001005 -
Pvu8g0966 364 PANTHER - 12 364 - -
Pvu8g0966 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 68 123 IPR006447 GO:0003677
Pvu8g0966 364 MobiDBLite consensus disorder prediction 344 358 - -
Pvu8g0966 364 Gene3D - 67 125 - -
Pvu8g0966 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 12 364 IPR044848 GO:0003700
Pvu8g0966 364 SUPERFAMILY Homeodomain-like 67 122 IPR009057 -
Pvu8g0966 364 MobiDBLite consensus disorder prediction 38 52 - -
Pvu8g0966 364 MobiDBLite consensus disorder prediction 1 60 - -
Pvu8g0966 364 MobiDBLite consensus disorder prediction 1 23 - -
Pvu8g0966 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 124 IPR017930 -
Pvu8g0966 364 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0966 Pvu-Chr8 9786222 9788415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0966 59 151 G2-like Transcription Factor Family AT2G42660 56.881 1.53e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu8g0966 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0966 - - gmx:102662997 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0966 8 9786222 9788415 Pvu8g0966 8 9786222 9788415 ECH
Pvu8g0966 8 9786222 9788415 Pvu10g0815 10 27091864 27093588 PCT