Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0963 ATGGCTTCTCAAACTCTTCTGCTCCTCTTATTTCTCTCTTCCTTACACCAAATTGCCTCCTTGGAGACTTTGATCTATGAAGGATTTGATGAAAACAGTGAAATAAGCCGTGAAGGATCTTCCATCATCAAAACCAGCCATTTACTTAAACTCACCAACAGATCAACCAATATTGTAGGCCGTGCATTCTACAAAACACCCTTCCAAATGCTTAACCAAACAGACCCTCAACCCTATGCTTATTCCTTCAGCACCAACTTTGTTTTCTCAATTGTATCCCCTAATTCTGGTTCTGGAGGCTTTGGCCTTGCCTTCACCATAGCACCATCAACACACTTTCCAGGGGCTGAGGCTGGCCACTATCTTGGTCTTTTTAACTCCACCAATGATGGGGAGGCCTCAAATCACATCTTTGCTGTTGAGTTTGACACTGTAAATGGTCACAAAGGTGACGCAGACTCTGAAGGAAACCATGTTGGGGTCAATACAAATGGCATGGAATCAAAGATTACTGAACCAGCTGCATACATTGAAGAGGGTACTGCTACTGTAAAGGACGATTTTAGAATGGCCAAGGTTGATGCTGTCCAAGCTTGGATAGAGTATGATGGTGAAAAGAAAACTCTGAATGTAACAATAGCTCCTTGGGAATTACCAAGGCCCAGCACACCACTTATCAATAATTATAACCTTGACCTTTCCAACGTTATGAAGGAAAACATGTTTGTTGGTTTCTCAGCATCAACGGGCCAGGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCGGTGAACGGTGTTGCCCCTTCACTGAATTCTTCTAATCTTCCAAATCCACCACCCAAGGAGGAAGATCCATCTTCATTTCCTTGGGTCCAGGTTGCAGTTGCCATCTTGTCTGCTTTGATTTTGAGCCTTTTGTGTCTTCTAATTTTTCTGGCATGTTGTAAGAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAGAAGGATTGTCCTCACAGGTTTAGATACAAAGATCTTAAACTTGCCACACAAGGGTTCGAAGAGAGCCAACTAATTGGAGTTGGAGGCTTTGGTGCTGTCTACAAAGGAGTCTTACCAACTACAGGAACTGAAGTAGCTGTTAAGAGGATTGTGAGAAGCCCTTTCCATGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTGAGGCACAAGAATCTGGTGAACCTTCAAGGATGGTGCAAGAAAAAGAATGACCTACTCCTAGTCTATGATTTCATTCCAAATGGAAGCCTTGATTTTGTCCTATATAACCCCGATAACAACTTTGTTTTGGACTGGGGGCAAAGATTCAACATTCTGAAAGGCATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGACGTGAAAACTAGCAATATTTTGATAGATGGGAACTTGAGTGCACGTTTAGGTGACTTTGGACTTGCAAGGCTCTATAACCATGGTCAAGCATCACACACAACCAATGTGGTTGGCACCATTGGCTACATTGCACCAGAGCTAACTCGCACAGGAAAGGCTTCTACAAAAACTGATGTGTATGCATTAGGGGTTGTGCTCCTTGAAGTGGTCACAGGTAAAAGGCCTCTTGATTCAGATCAGTTTTTCTTGGTGGAATGGGCGATTGAGAACTACCATTTGGGTCAACTTCTTGAGGTGGTTGATCCTAAGCTGGATTCAGTTTATGATGCGGAAGAAGTTGAGTTGGTTCTCAAGTTGGGTTTACTATGCTCTCAACATAGACCAGATTATAGACCTACCATGAAACAAGTTACAAGGTACCTAAACTTTGATGACCCTCTTCCTGATACTGCTGATTGGGGACATTTTGGTTCTAATAGCAGCAGCAGAATGAACTCAGGTTTCTTAGAAGTCACGTCATCTTTGAGAACTGTTGAAACATCAGGCTATTTGTCCTCCATTAGCATGAGTACCAAGTCCATGGATGCTGGTAGATAG 2022 0.4303 MASQTLLLLLFLSSLHQIASLETLIYEGFDENSEISREGSSIIKTSHLLKLTNRSTNIVGRAFYKTPFQMLNQTDPQPYAYSFSTNFVFSIVSPNSGSGGFGLAFTIAPSTHFPGAEAGHYLGLFNSTNDGEASNHIFAVEFDTVNGHKGDADSEGNHVGVNTNGMESKITEPAAYIEEGTATVKDDFRMAKVDAVQAWIEYDGEKKTLNVTIAPWELPRPSTPLINNYNLDLSNVMKENMFVGFSASTGQETSSHYLLGWSFAVNGVAPSLNSSNLPNPPPKEEDPSSFPWVQVAVAILSALILSLLCLLIFLACCKRYMDFEVLEDWEKDCPHRFRYKDLKLATQGFEESQLIGVGGFGAVYKGVLPTTGTEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDFIPNGSLDFVLYNPDNNFVLDWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLSARLGDFGLARLYNHGQASHTTNVVGTIGYIAPELTRTGKASTKTDVYALGVVLLEVVTGKRPLDSDQFFLVEWAIENYHLGQLLEVVDPKLDSVYDAEEVELVLKLGLLCSQHRPDYRPTMKQVTRYLNFDDPLPDTADWGHFGSNSSSRMNSGFLEVTSSLRTVETSGYLSSISMSTKSMDAGR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0963 673 Pfam Legume lectin domain 25 278 IPR001220 GO:0030246
Pvu8g0963 673 Pfam Protein kinase domain 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0963 673 ProSiteProfiles Protein kinase domain profile. 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0963 673 SUPERFAMILY Protein kinase-like (PK-like) 333 620 IPR011009 -
Pvu8g0963 673 Gene3D Transferase(Phosphotransferase) domain 1 426 626 - -
Pvu8g0963 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Pvu8g0963 673 CDD STKc_IRAK 355 617 - -
Pvu8g0963 673 SMART serkin_6 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0963 673 CDD lectin_legume_LecRK_Arcelin_ConA 25 267 IPR001220 GO:0030246
Pvu8g0963 673 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Pvu8g0963 673 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 6 665 - -
Pvu8g0963 673 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Pvu8g0963 673 Gene3D - 23 270 - -
Pvu8g0963 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 282 IPR013320 -
Pvu8g0963 673 PANTHER - 6 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0963 Pvu-Chr8 9731145 9733166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0963 24 642 Receptor kinase-like Gene Family AT5G01560 48.336 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu8g0963 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0963 - - gmx:100802724 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0963 8 9731145 9733166 Pvu10g0632 10 9989769 9992368 PCT
Pvu10g0163 10 2529834 2531894 Pvu8g0963 8 9731145 9733166 PCT