Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0962 ATGATGCAGCAAGAGGATATGCAATCCCCTTGTTCATTCTTTGAAGACATGAACTCAACCTTTGAATCAGGTGTTGAGTCCTGTGCCTTCACTGGGTATGATCCTAGTGTTGATTCCTGTGCCTTCACTGTGTATGATCATGTTGGTGATTGTGTACCCTATGGCTTCAGTGTGGATGACCATGTTGGTGACTGTGGACTCAATACACTGTTGAGCAGTCTACAGGATTCCACTTCTGAAATTTGTTCCATACCCTTTTCTTCCTCCCCCTTAGTTTTCTCCAATGATCATATTCATATCCAATACCCAATCAATGAAGAAACTGTGCAACTTCCATCACTCATGGAATTGGATGATCTTGATTCCATCCTGGATACTGAAATTGCTAGTTTTCAAGGTCATGGATACCTGAGAGAGAGTGAAGGGAGCTTCTTCCCTTCACAGAATTTGTCGAGTGAGGTGGAAAATGCTTGGAGTCCTACCCCATCTGTGAGGTCAGAGTTGTCCACAAATCAAACATCACCATTGAATTTACCTCACGAAAACAAGGAAATTGAGAACCAAGTGAGTCTTCCACACTTGCTGGAGGCATATGGAGAGGCCTTGGAGCAAGGACAAAAATCACTAGCAGAAGTGATTTTGAGGTGCATGAGCCAGAAGGCTAGTCCACTAGGTGAGTCTCTAGAACGCCTTGTATTCTACTTGTCTCAAGGAATGACCAATCATGGAGACTATCTCAAAGGGGAGGCCTTCAAGAACTTTGAGCCTGCTTCGAGGGCACTCTATCAAGGTCTCCCAATTGGGAAAATTGCTGACTTTGCAGCTGTTTCTGCAATTCTTGAAGCCATGCCACAAGATTGTACCGGTGTACACTTAGTGGACTTTTGTATTGGAAATGGGGTTCGATGGGCTTCACTGATTGAGGCTATTGCACACATGAACAAAACATTGAAATTGACATCAATTAAATGGGATGGTGAGGGTCTTGAATGTGGTTCCAGTCCATCAAGTTTTGATGAAACTAAAAGGCACCTCTATGAGCATGCCAAATCCTGTGGTTTGAAGTTGAAGGTAGAGGAGAAAGGAGTGAAGGAACTTGTTGCTGAGATTAAGAAAATGGACAAAAGGGGTGGGAGGGGTGAGTTTTTGGCCTTCAATTCTATGATTGATCTTCCACATATGGGAAGAGTAAGAACCAGAAGACAAGCCCTACAGTTTCTAAAGGTGGCTCAGGATTTGATCAACACCTCTGGCAGTAGGGGAATTATAACTTTTGGGGATGGAGGTGCTTGTGAGAAAGTGAAAAACAACTTGAATTTCAGGTCATTCTTTACAGTACATTTATTGCATTACCAAGCCTTGTTACAATCAATTGAATCACATTTCCCAAGTCGTTTCTCAGAAGCAAGAATTGCCATGGAGCAATTGTTTTTGCAACCTTGTATCTCCTCTCTTGATTGGTTACAAACATGGGAGGAGATGCAGAGGGGTGACCCTGTTGAGGCTGAGATTAGCTTGAAGGGTTGCCAATTGAGCAAAAATATTTTGATGGAAATCAGAGAAGTTTTGAGAGGAAGTGAAGGCTCATATGAAGCCAGGATTGAAGGACAAAATGACAATGAACTAGTTTTGGAGTACAAAGGAATTCAACTACTAAGATTTTCAACTTGGAAAAACTAA 1680 0.4232 MMQQEDMQSPCSFFEDMNSTFESGVESCAFTGYDPSVDSCAFTVYDHVGDCVPYGFSVDDHVGDCGLNTLLSSLQDSTSEICSIPFSSSPLVFSNDHIHIQYPINEETVQLPSLMELDDLDSILDTEIASFQGHGYLRESEGSFFPSQNLSSEVENAWSPTPSVRSELSTNQTSPLNLPHENKEIENQVSLPHLLEAYGEALEQGQKSLAEVILRCMSQKASPLGESLERLVFYLSQGMTNHGDYLKGEAFKNFEPASRALYQGLPIGKIADFAAVSAILEAMPQDCTGVHLVDFCIGNGVRWASLIEAIAHMNKTLKLTSIKWDGEGLECGSSPSSFDETKRHLYEHAKSCGLKLKVEEKGVKELVAEIKKMDKRGGRGEFLAFNSMIDLPHMGRVRTRRQALQFLKVAQDLINTSGSRGIITFGDGGACEKVKNNLNFRSFFTVHLLHYQALLQSIESHFPSRFSEARIAMEQLFLQPCISSLDWLQTWEEMQRGDPVEAEISLKGCQLSKNILMEIREVLRGSEGSYEARIEGQNDNELVLEYKGIQLLRFSTWKN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0962 559 ProSiteProfiles GRAS family profile. 182 558 IPR005202 -
Pvu8g0962 559 MobiDBLite consensus disorder prediction 157 178 - -
Pvu8g0962 559 Coils Coil 356 376 - -
Pvu8g0962 559 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 42 558 - -
Pvu8g0962 559 Pfam GRAS domain family 193 558 IPR005202 -
Pvu8g0962 559 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 558 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0962 Pvu-Chr8 9704850 9706562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0962 179 485 GRAS Transcription Factor Family AT5G66770 24.923 2.63e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g0962 GRAS 6.4e-32 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0962 - - gmx:100792407 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0962 8 9704850 9706562 Pvu8g0962 8 9704850 9706562 ECH