Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0930 ATGGGAGGCTGTTGCAGCCACGATGTTTCGGTTCGAGGGAAGGTAGAAAGCGAGATGGATGAAAGGGAATATGAGTATGATCATGAAAATGATGTGTCTTTTAATCATGGTGGAGCATTGGTGAGGTTAAGAGGATCCTCCAAGTTTGTTTCAATGTACACCCAACAGGGCCAGAAAGGTGTGAACCAAGATGCAATGGCAGTTTGGGAGGACTACGCAGGAGAAAAGGATGTGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTTATTCGTGACAATCTGCCCTCAAAACTGTCCGCAGCAATCGAAATTTCACAGCAGAAGGCAATAAAATTTTATGATGCCAATGATGCAGACACTTCTAGTTTTGATGATGGCTACGATAACAGTAACCAAATGTCACTTGCTTCATGGGAGGGATGCTTTCTGAAATCCTTTAGTGAGATGGATGAGTACCTTGCTCGGGAAATTAACACTGACAGCTATTGCAGTGGTTGTACCGCTGTGACTTTAATTAAACAGGGTGACCAGCTGATAGTTGGCAATTTGGGCGATTCTCGTGCAGTTCTTTGCACAAAGGACAAGGACCAACTCATTGCAGTTCAACTCACTGTTGACTTGAAACCAGAGATTCCAAGTGAAACCTCAAGAATCGTTAACTGTGAAGGAAGAGTGTTTGCAGCGGAAGAAGAACCAGACGTGTACAGAATATGGATGCCTGATGATGACTGCCCTGGACTAGCCATGTCTAGAGCCTTTGGGGATTTTTGCCTCAAAGATTATGGCCTCATCTCAGTTCCTGATGTATTTTACAGAAAAATTACCCCACAAGATCAATTTGTGGTTTTGGCAACTGATGGGATATGGGATGTGCTCACTAACCATGAAGTAATAAGCATAGTTGCTTCTGCACCAAGGAGGTCCGTGGCAGCCAAGTTGTTAGTGAAGCGTGCTGTAAGAGCCTGGCGATACAAATATCCTGGTTCCAAGGTTGATGATTGTGCTGCCATATGCTTTTTTCTCGATGAACAACCTGTTCTATCCCATTCACAATCCCATATGAGTGGAAAAAATAGATCGTGCAGCAAGCAATTGCATCGCTCTAAAACCACTGGAAATGAAGACACTGAAACAGTGGATGGCAAGGTTGGGTTGGAACTAGATGAAGAATGGAAAGCTCTTGGAGGGTTTTCAAGAGCCAACTCTTTATCAAAACTTCCACGCCTTGCTAGGGGTATGAGTAAACGGCAATCGTCCAAGTACTATTCACCGCGTTGA 1302 0.4416 MGGCCSHDVSVRGKVESEMDEREYEYDHENDVSFNHGGALVRLRGSSKFVSMYTQQGQKGVNQDAMAVWEDYAGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEISQQKAIKFYDANDADTSSFDDGYDNSNQMSLASWEGCFLKSFSEMDEYLAREINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTKDKDQLIAVQLTVDLKPEIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITPQDQFVVLATDGIWDVLTNHEVISIVASAPRRSVAAKLLVKRAVRAWRYKYPGSKVDDCAAICFFLDEQPVLSHSQSHMSGKNRSCSKQLHRSKTTGNEDTETVDGKVGLELDEEWKALGGFSRANSLSKLPRLARGMSKRQSSKYYSPR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0930 433 MobiDBLite consensus disorder prediction 359 387 - -
Pvu8g0930 433 PANTHER ALPHABET, ISOFORM E-RELATED 1 409 - -
Pvu8g0930 433 SMART PP2C_4 40 347 IPR001932 -
Pvu8g0930 433 MobiDBLite consensus disorder prediction 359 375 - -
Pvu8g0930 433 Pfam Protein phosphatase 2C 73 326 IPR001932 -
Pvu8g0930 433 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 409 - -
Pvu8g0930 433 CDD PP2Cc 49 349 IPR001932 -
Pvu8g0930 433 Gene3D - 43 351 IPR036457 -
Pvu8g0930 433 ProSiteProfiles PPM-type phosphatase domain profile. 49 349 IPR001932 -
Pvu8g0930 433 SUPERFAMILY PP2C-like 46 351 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0930 Pvu-Chr8 9293143 9296477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0930 1 353 PP2C-type Phosphatase Gene Family AT5G01700 54.391 1.31e-134 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0930 - - vun:114185420 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0930 8 9293143 9296477 Pvu8g0930 8 9293143 9296477 ECH
Pvu8g0930 8 9293143 9296477 Pvu10g0656 10 11413759 11415954 PCT