Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0920 ATGACCATGGGTGATCATAATAACAACTGGGGAACTTCTGAATTTAATCATCATCAAGTTGGACTTCTTGATGTTCCAAAATTCAAGTCTGCTCAACCTCCCTCACTACCCCTCTCTCCCTCTCCAGCCTCCCCTTCTTCTTACTTGGCCTTTTCGTCTGCTTTCAGCCCATCTGAGTTCTTCAACTCTTCTTTGTTTTCTCCTTCTCCAAATATTTTTGCATCTCCTACTACTGAGCCTTTGGCTGGCCAGACCTTCAACTGGAGGAACGGTTCAGGAGAAGAACAACAACGTGACAAGGAGGATGAGAAAAACTACTCGGACTTCTCTTTCCAAACTCAAATTCAATCTTCCTCAGGCATGTTTCAAGTGCAGGAACCACTTAAGAAACAAGATATATGGAAATTCAATGAACCTTCAAAGCGAACTGATTTTTCATCTGATAGGACAGCAACAAAATCTGAATACCCTTCAATTCAGAGCTTTTCCTCAGAAATGGCATCGGATAAATCAGAATTACAAAGCAATTCAGTTCCTGGATCTAGTCGTTTTGATTACCCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCAGAAGATGGGTTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTATAAGTGCACACATCCAAATTGCTTAGTGAAGAAGAAAGTAGAGATGTCTTTGGATGGCCAAATTACTGAAATAGTGTACAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAACAAACTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCGGGGATTTCAGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGATCATTTCTCCATGCAGGAAGATTCTTCAGCTTCCGTAGGAGAGGAAGAGTTTGAGCAAACATCCCAAACCAGTTATTCTGGGGGAGATCAAGATAACCTTGGACCAGAGGCCAAACGATGGAAAGGAGATAATGAAAATGATGACTATTCCGCCTCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTGAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATCAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAGAAATTCCCTGAACAGCAACATATCCGCTCCTATAAGACCCTCGGCAGTGAACTGTTATTCTAGCTCATCAGGTTTCAAAAATTCTCTCTACGATAATACCAGGCTTCCAGCAACCGGAAATCAAGAATCGTTTTCACAGGACAGGTTCCAGCACCCAGGAAGTTTTGGCCATTCGGCTCTTAACAAATCAATGGGTTCATATGCTGATCATGCACTGTACTCAGATGCTGCACACTCAAATGTCAAGGATGAGAAGAAGGATGACTCCTTCCTTCAGTCATTTCTGTCAAAGGACTTCTAA 1620 0.421 MTMGDHNNNWGTSEFNHHQVGLLDVPKFKSAQPPSLPLSPSPASPSSYLAFSSAFSPSEFFNSSLFSPSPNIFASPTTEPLAGQTFNWRNGSGEEQQRDKEDEKNYSDFSFQTQIQSSSGMFQVQEPLKKQDIWKFNEPSKRTDFSSDRTATKSEYPSIQSFSSEMASDKSELQSNSVPGSSRFDYPNASQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPNCLVKKKVEMSLDGQITEIVYKGHHNHPKPQSTRRTNSQSIHQPSSSCTNSGISDQSVVTLGNPQMDHFSMQEDSSASVGEEEFEQTSQTSYSGGDQDNLGPEAKRWKGDNENDDYSASGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNRNSLNSNISAPIRPSAVNCYSSSSGFKNSLYDNTRLPATGNQESFSQDRFQHPGSFGHSALNKSMGSYADHALYSDAAHSNVKDEKKDDSFLQSFLSKDF* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0920 539 MobiDBLite consensus disorder prediction 76 92 - -
Pvu8g0920 539 MobiDBLite consensus disorder prediction 251 352 - -
Pvu8g0920 539 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 ProSiteProfiles WRKY domain profile. 194 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 MobiDBLite consensus disorder prediction 329 349 - -
Pvu8g0920 539 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 303 536 - -
Pvu8g0920 539 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 19 286 - -
Pvu8g0920 539 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 MobiDBLite consensus disorder prediction 26 46 - -
Pvu8g0920 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 303 536 IPR044810 GO:0003700
Pvu8g0920 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 286 IPR044810 GO:0003700
Pvu8g0920 539 MobiDBLite consensus disorder prediction 150 193 - -
Pvu8g0920 539 Gene3D WRKY domain 355 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 SUPERFAMILY WRKY DNA-binding domain 195 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 MobiDBLite consensus disorder prediction 133 220 - -
Pvu8g0920 539 Pfam WRKY DNA -binding domain 369 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 Gene3D WRKY domain 186 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 SUPERFAMILY WRKY DNA-binding domain 360 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0920 539 MobiDBLite consensus disorder prediction 260 325 - -
Pvu8g0920 539 MobiDBLite consensus disorder prediction 133 149 - -
Pvu8g0920 539 MobiDBLite consensus disorder prediction 76 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0920 Pvu-Chr8 9198199 9201344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0920 23 460 WRKY Transcription Factor Family AT2G38470 50.667 5.16e-112 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0920 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0920 K13424 - gmx:100776837 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0920 8 9198199 9201344 Pvu8g0920 8 9198199 9201344 ECH
Pvu8g0920 8 9198199 9201344 Pvu10g0649 10 11258171 11261871 PCT