Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0885 ATGACCCTTTCAAATATCATAGTTCGTTTCTTCTTACTCTTTTCCCTTATAGGGATAGTCTCAGCCCAGTTATCCTCTACCTTTTATGCCAAAACGTGCCCTAATGCTCTCTCAACCATTAAATCAGAAATAGTCTCTGCTGTTAACAAAGAGCCTCGCATGGGGGCTTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCGGTGTTATTGGATGATACATCAAGTTTCACAGGAGAGAAATCAGCGGGTCCCAACGCTAATTCCATAAGAGGCTTTGATGTAATAGACACCATAAAGTCTAAAGTGGAGAGCTCATGCCCTGGTGTTGTTTCTTGTGCTGATATACTTACTGTAGCAGCTAGAGACTCAGTCGTTGCACTTGGTGGAGCTGGTTGGAGTGTGCCATTGGGTAGAAGAGACTCAACCACTGCAAGTTTCAGTTCTGCTAATTCAGACTTACCTGGCCCCTCTTCAAGTTTAAGTTCCCTCATCTCTTCTTTCTCCAACAAAGGTTTTACAGCTAAAGAAATGGTGGCTCTTTCAGGTAGCTAG 573 0.4346 MTLSNIIVRFFLLFSLIGIVSAQLSSTFYAKTCPNALSTIKSEIVSAVNKEPRMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKSAGPNANSIRGFDVIDTIKSKVESSCPGVVSCADILTVAARDSVVALGGAGWSVPLGRRDSTTASFSSANSDLPGPSSSLSSLISSFSNKGFTAKEMVALSGS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0885 190 PANTHER PEROXIDASE 16 190 - -
Pvu8g0885 190 Gene3D Peroxidase, domain 2 161 190 - -
Pvu8g0885 190 Gene3D - 27 160 - -
Pvu8g0885 190 ProSiteProfiles Plant heme peroxidase family profile. 23 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 SUPERFAMILY Heme-dependent peroxidases 23 190 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Plant peroxidase signature 182 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 PRINTS Haem peroxidase superfamily signature 183 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 Pfam Peroxidase 41 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu8g0885 190 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Pvu8g0885 190 PANTHER PEROXIDASE 72-RELATED 16 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0885 Pvu-Chr8 8629913 8631928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0885 19 190 Peroxidase AT5G05340 66.860 8.78e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0885 K00430 - gmx:100815142 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0885 8 8629913 8631928 Pvu10g0693 10 15792965 15795651 PCT