Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0873 GTTTGTGTTGGAGCAAGTAGGGTCTCTATATTAAATGTTTCACCTTATCAATCTACACCATTTAAGGATAATGGGGAACCTGCTTTTAAGTTTCCTACACCTACCATTCAACCTATTTCCCCTGATGTGTTTTGTTACAAAAACGCTCATACTCCTTCCGAAGTTTTTGCCACTCATGTTTCTGCTATATCACCAAACACTATTATATCTGAACATGTCCCGTCTGGTTGGGTTCAAATGCCTAACTATTCAAATCACTCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGTTGTTTATTATTGGACTTCAAAATTGTAGTTGGGGAGATTGGAAAAACATTTCAAAATATTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTCAAAAATATAGGCATCATCAAAACGGTCTAAAGAAAAATAAGAAGAGAAAAAGTATCCACGACATATCCTTTGACGACACTAAGTGA 513 0.3645 VCVGASRVSILNVSPYQSTPFKDNGEPAFKFPTPTIQPISPDVFCYKNAHTPSEVFATHVSAISPNTIISEHVPSGWVQMPNYSNHSTPPVLKSHHKQYEHWTENEHRLFIIGLQNCSWGDWKNISKYYIPSKTPTQIASHAQKYRHHQNGLKKNKKRKSIHDISFDDTK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0873 170 Gene3D - 99 153 - -
Pvu8g0873 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Pvu8g0873 170 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 72 168 - -
Pvu8g0873 170 MobiDBLite consensus disorder prediction 148 170 - -
Pvu8g0873 170 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 72 168 IPR043363 -
Pvu8g0873 170 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Pvu8g0873 170 CDD SANT 102 145 IPR001005 -
Pvu8g0873 170 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Pvu8g0873 170 SUPERFAMILY Homeodomain-like 96 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0873 Pvu-Chr8 8486652 8487475 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu8g0873 Myb_DNA-binding 7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0873 - - pvu:PHAVU_004G065500g 306.605