Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g0873 | GTTTGTGTTGGAGCAAGTAGGGTCTCTATATTAAATGTTTCACCTTATCAATCTACACCATTTAAGGATAATGGGGAACCTGCTTTTAAGTTTCCTACACCTACCATTCAACCTATTTCCCCTGATGTGTTTTGTTACAAAAACGCTCATACTCCTTCCGAAGTTTTTGCCACTCATGTTTCTGCTATATCACCAAACACTATTATATCTGAACATGTCCCGTCTGGTTGGGTTCAAATGCCTAACTATTCAAATCACTCAACACCTCCCGTATTGAAGTCACATCACAAGCAATATGAGCACTGGACAGAAAATGAACATAGGTTGTTTATTATTGGACTTCAAAATTGTAGTTGGGGAGATTGGAAAAACATTTCAAAATATTATATTCCATCAAAAACTCCAACTCAAATTGCAAGTCACGCTCAAAAATATAGGCATCATCAAAACGGTCTAAAGAAAAATAAGAAGAGAAAAAGTATCCACGACATATCCTTTGACGACACTAAGTGA | 513 | 0.3645 | VCVGASRVSILNVSPYQSTPFKDNGEPAFKFPTPTIQPISPDVFCYKNAHTPSEVFATHVSAISPNTIISEHVPSGWVQMPNYSNHSTPPVLKSHHKQYEHWTENEHRLFIIGLQNCSWGDWKNISKYYIPSKTPTQIASHAQKYRHHQNGLKKNKKRKSIHDISFDDTK* | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g0873 | 170 | Gene3D | - | 99 | 153 | - | - | |
Pvu8g0873 | 170 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 94 | 150 | IPR017930 | - | |
Pvu8g0873 | 170 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 72 | 168 | - | - | |
Pvu8g0873 | 170 | MobiDBLite | consensus disorder prediction | 148 | 170 | - | - | |
Pvu8g0873 | 170 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 72 | 168 | IPR043363 | - | |
Pvu8g0873 | 170 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 97 | 149 | IPR006447 | GO:0003677 | |
Pvu8g0873 | 170 | CDD | SANT | 102 | 145 | IPR001005 | - | |
Pvu8g0873 | 170 | Pfam | Myb-like DNA-binding domain | 101 | 146 | IPR001005 | - | |
Pvu8g0873 | 170 | SUPERFAMILY | Homeodomain-like | 96 | 150 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g0873 | Pvu-Chr8 | 8486652 | 8487475 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu8g0873 | Myb_DNA-binding | 7e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g0873 | - | - | pvu:PHAVU_004G065500g | 306.605 |