Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0868 ATGGAAATTGGAAGAGAGAATGAGATTGTGGACATGTCCATGTCACCCCCAGTAGTTGGTTCCATTATTAACAATGACTTTTGTTACCACAAAGAGTTCATGTCTCAGCCATATCTTCAGAATAAGTACTCAGAGATTGACATAGATACTGAAGATTCCAATTTCGATCAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAACCAAACAGGCTCAGGTAACCTTGTGAAGACAATGGTGTCAAAGGTAACCGCACAACTCACTGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCATTGATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTTATAGGAGGAAGACTAGTTGACAATGTAAAGGGAAAAGTAACTTACAATGATGTTCGTTTCACTCCAGCTCTCAAGAGGAGGATTGGGTTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACAGTTGAAGAAACTTTAGTCTTCTCTGCACTTTTGAGGCTACCAAGCAATATGAGCAAGCAGCAAAAGTATGCAAAAGTAGATACCACCATCAAGGAGCTAGGCCTAGAAAGATGTCGCCACACAAAAATAGCTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTATGAAATTCTTGTTGATCCCTCACTATTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCTCCTCAGCAAACAAACTCCTTCTCACTCTTCAAGGACTTGCCAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCATCCAGTAGAATCTTTCACATGTTTGACAAACTACTTCTGATATCAGAAGGCTATCCTGTTTACTATGGAAAGGCTAAGGAAACAATGGAGTACTTTTCATCTTTGAGATTCACCCCTCAAATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACAGATATCTTTCAGGATCAAGAATCTTCCGACCCTTCAAAAATTGTTATTGAATATCTACAGCTCAAATACAAATCTCTACTGGAGCCAAAAGAAAAAGAAGAGAACCATAGAGTAGCAAGCACACCAGAACAGCTTCAACTAGCAATTCAGGTTAAGATGGAGTGGTCATCGAGTTGGCTGGACCAATTTGTGATTCTCTCCAGGAGAACATACAGAGCAAGAAGAAAGGACTACTTTGATAAGCTAAGACTAGTTCAAGCACTTGGGATTGCACTTTTGTTGGGGCTCCTTTGGTGGAAATCTTCAACCAATACTGAAGCTGGACTCAGAGATCAGGTTGGTTTAGCATTCTACATCTGTATATTCTGGACATCTTCATGCATTTTTGCAGCAGTCTATGTCTTTCCATTTGAGAAGTACTACTTGATAAAAGAAAGTAAAGCTGACATGTACAGATTAAGTGTATACTATGCATGTAGCACTCTATGTGACATGGTGGCAACCCTTTTCTATCCTACTTTTTTCATGCTCATCTTGTACTTCATGGCTGGCTTTAAGAGAGCTGTTGCTTCCTTCTTTTTGACACTATTAACTATTCTGTTAATAGCTATAACAAGTCAAGGAGCAGGTGAAATGTTTGGAGCTGCAATTATGAGTGTTAAAAGAGCAGGTACTGCTGCTTCTTTGATACTAATGCTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGAGATGGTTGAAGTATTTATCCTTCATGTACTATGGTTTTAGGCTTCTTCTAAAAGTGCAATATTCTGGAGAGCAGTTATATGATTGTGGAAGCAATGGAGGGTGCAGGCCCTTGCAGAGTTCTCCAACATTTGACATTGTAAACTTGAAGGGTGGATTGAAAGAAGTGTGGATTCTGCTAGCTATGGCATTGATCTTTCGGTTGTTAGCTTACTTGTGTCTCCGTGTAAGAATTGGTAGAAAAAACTAA 2052 0.4055 MEIGRENEIVDMSMSPPVVGSIINNDFCYHKEFMSQPYLQNKYSEIDIDTEDSNFDQNRPLPIFLKFEDVEYKVRNNQTGSGNLVKTMVSKVTAQLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKVTYNDVRFTPALKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPSNMSKQQKYAKVDTTIKELGLERCRHTKIAGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSSSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKETMEYFSSLRFTPQIPMNPAEFLLDLATGQVNDISVPTDIFQDQESSDPSKIVIEYLQLKYKSLLEPKEKEENHRVASTPEQLQLAIQVKMEWSSSWLDQFVILSRRTYRARRKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAGLRDQVGLAFYICIFWTSSCIFAAVYVFPFEKYYLIKESKADMYRLSVYYACSTLCDMVATLFYPTFFMLILYFMAGFKRAVASFFLTLLTILLIAITSQGAGEMFGAAIMSVKRAGTAASLILMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGEQLYDCGSNGGCRPLQSSPTFDIVNLKGGLKEVWILLAMALIFRLLAYLCLRVRIGRKN* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0868 683 Pfam ABC-2 type transporter 286 347 IPR043926 GO:0140359
Pvu8g0868 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 676 - -
Pvu8g0868 683 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Pvu8g0868 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 65 329 IPR003439 GO:0005524
Pvu8g0868 683 Pfam ABC transporter 107 257 IPR003439 GO:0005524
Pvu8g0868 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 676 - -
Pvu8g0868 683 SMART AAA_5 116 307 IPR003593 -
Pvu8g0868 683 Gene3D - 89 324 IPR027417 -
Pvu8g0868 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 322 IPR027417 -
Pvu8g0868 683 CDD ABCG_EPDR 103 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0868 Pvu-Chr8 8459258 8463033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0868 105 290 Calmodulin-binding Proteins AT2G36910 30.622 6.80e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0868 K05681 - gmx:100806094 1174.07