Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0865 ATGGGTAACTACAGGTTCAAATTATCAGATATGATCCCAAATGCCTGGTTTTACAAACTCAAGGACATGGGAAAAGCAAGAAAGCGAACCCCAACTCAGTCCAAGAAGAAAAAACAACCTTCACCATCCTCAACCACACAACCTTCAAAACCAAAGCAACCCCACCAATTCAATACCAGGAAGTCTTACTACTTCACAAGGGAGCTTAACCCAAATGATAGAATCTACACCTCGCCACCAAATAAACAAAATGCCAAATACAATGATTCCCCTGAAGCCCCCCGAAAATCATCCAAACAAAGACTCAAGAGAAGAACTGCAAGGACTTCTTCACCTAAGCTTGCTGTTGCCGCTAACAATGACAACTCCTCGTCACCACATGATAGCTCTGTTGAATCAGAGTACCCTGACCCAGAATTCAGAACAGACCGTGTTCTCGCCACTGAAGCATTAGATGAAACGGTTTCCTGGTCCAACTCTTTTGCCTGCAAGGTACACTCCAACGCCAAGGACATCATCATTGATGTAGACAACAATTCCACAGAAAGAAAAGACGATAAGCTAGAAGGGTATGAATATGATTCCTTGTCAGACCTCGTGCTTCCACCAATTGTGACCAAGCCTGCAAAATTCAACGACTTGCTGAGTGATGCCAAGAAGAAAGAAACCAAAACCAAAACCAAAATGGATGCACAAGAAGAACTAAACCTGAAGGGGCCTCTAAGAGTTAAAATTGTGAAGGAAGGCGCTGCACCAATGAAGGAACATAAGAACACCCCTGCTAGGAGATTCTCTGTGAGTTCTTCTCCAGGAGTGAAGCTTCGGATGAACTCGCCGCGAATTGCCACCCGGAAAGCTCAGGCACATGGCCGGAGGAATGCGTCGTCCGCCGCTGGCTCCGGCTCCCAGAGAAGCCTCTTGGATAGCTTTGCAATTGTGAAGTCATCACTAAATCCACAGAGGGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAATAACATAAGGACATCAAAGGATTTAGAAGATCTTCTTGCTTGCTATCTTTCTCTTAATTCAGATGAGTATCATGACCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1128 0.4397 MGNYRFKLSDMIPNAWFYKLKDMGKARKRTPTQSKKKKQPSPSSTTQPSKPKQPHQFNTRKSYYFTRELNPNDRIYTSPPNKQNAKYNDSPEAPRKSSKQRLKRRTARTSSPKLAVAANNDNSSSPHDSSVESEYPDPEFRTDRVLATEALDETVSWSNSFACKVHSNAKDIIIDVDNNSTERKDDKLEGYEYDSLSDLVLPPIVTKPAKFNDLLSDAKKKETKTKTKMDAQEELNLKGPLRVKIVKEGAAPMKEHKNTPARRFSVSSSPGVKLRMNSPRIATRKAQAHGRRNASSAAGSGSQRSLLDSFAIVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0865 375 MobiDBLite consensus disorder prediction 282 301 - -
Pvu8g0865 375 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 311 373 IPR006458 -
Pvu8g0865 375 MobiDBLite consensus disorder prediction 23 139 - -
Pvu8g0865 375 ProSiteProfiles OVATE domain profile. 312 371 IPR006458 -
Pvu8g0865 375 MobiDBLite consensus disorder prediction 36 91 - -
Pvu8g0865 375 MobiDBLite consensus disorder prediction 112 131 - -
Pvu8g0865 375 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 375 IPR038933 GO:0045892
Pvu8g0865 375 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Pvu8g0865 375 Pfam Transcriptional repressor, ovate 316 372 IPR006458 -
Pvu8g0865 375 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0865 Pvu-Chr8 8381572 8382699 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu8g0865 Ovate 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0865 - - gmx:100794572 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0865 8 8381572 8382699 Pvu8g0865 8 8381572 8382699 ECH
Pvu8g0865 8 8381572 8382699 Pvu10g0705 10 16779771 16781436 PCT