Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0854 ATGGAATTGCCTGATAGAGTCAATATAGACATGTACAAGGGAAGATTCTGCACGAGTGGTGGAGTTAAGTCTAAGCTTGGATATGTTGAAACTGATCCATCCGGTCGATATGGCCGTTTCAGGGATGTTCTTGGCAAAGGAGCAATGAAGACTGTGTACAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTAGGTGATGTCTTTCACTCACCAGAACAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTGAAGCACCTCAACCATGATTCTATGATGATCTTCTATGGTTCCTGGATCGATGTCAACAACAGAACCTTCAACTTCGTCACTGAATTGTTCACCTCCGGTACACTTAGAGAGTACAGGCAGAAGTATAAGCGAGTAGATATCCGAGCAGTTAAGATTTGGGCTCGCCAGATTCTTGGTGGTTTGGAGTATTTACACAGCCATAATCCTCCAGTAATCCATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTAGCAGCTATACTTCGTAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGGTAGACATATATTCCTTTGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACCCAGCTCAAATATACAAGAAGGTTACTTCGGGGAAGCTACCTAATGCGTTTTACAGAATCCCAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGTCAAATGTCTCGGATAGACCATCAGCAAAGGAGCTCTTGCTGGACCCTTTTTTAGCGGTGGACCAACTTGAAATACCATTGCCACCAAACATACCATTACTTCCAAATCACACTCTAAAGCTTAATTCCATCCCACCTCTTCCCATTGACCTTCATCGTGATCAAACAAAGTCTGCAGAAATGACAATTACTGGTTCAATAAACGAAGAGGACAACACTGTTTTCCTCAAAGTGAAGATATCTGACATAACAGGGCACACGAGACATGTGTTCTTCCCATTTGATACATTAAAAGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATTGATTATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGCACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCACCACCCCTTCTTCTTATCATCTTCTCCATCATCTCCTCGTGGTTCTGGACACACTGCTTCCAACTCCTTCAAAACCCATGTTTGTGGCAACCATTACCCTTTTGCTCTAGAAGGGCCTCAAGATGACATGTTCATGAACAACGACGACGCAAGCTCTCAAGCCTCAATGAACTCCTTTAAGTATTCAACCTTCCAATTCTGCGACCCGGGCCACGAAGACGAGCACGACGGAACCGAACGCCACAAGTGGACCACACTGTCGTACCGTGGCGGCGGCGAAGAAGGCGAACCCGCGAACCCGGTTTTGAACCCACCACGGATGGAGTGTTCGTGCGGGTGCAGGCTTGGGTCGGGTCACGGGTGCCCGAGGCTGACTCGGATCCGCTCGTGCCCGCACGAGCGGCGGAGCCAGCAGCTCCAAAGGTCGATGATGTTGGAGGAGATTTACAAGTACAACAGACGCTTCTTGAACACCGTTGGTACCGTTGAGAACATCGGATTTCGGCATCCACTAAGAGGTGGTGTGTGTTTTCCTCGTGTGTAG 1863 0.4691 MELPDRVNIDMYKGRFCTSGGVKSKLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFVTELFTSGTLREYRQKYKRVDIRAVKIWARQILGGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANPAQIYKKVTSGKLPNAFYRIPDLEAQKFVGKCLSNVSDRPSAKELLLDPFLAVDQLEIPLPPNIPLLPNHTLKLNSIPPLPIDLHRDQTKSAEMTITGSINEEDNTVFLKVKISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDYEVSALVPTWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHTASNSFKTHVCGNHYPFALEGPQDDMFMNNDDASSQASMNSFKYSTFQFCDPGHEDEHDGTERHKWTTLSYRGGGEEGEPANPVLNPPRMECSCGCRLGSGHGCPRLTRIRSCPHERRSQQLQRSMMLEEIYKYNRRFLNTVGTVENIGFRHPLRGGVCFPRV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0854 620 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Pvu8g0854 620 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Pvu8g0854 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Pvu8g0854 620 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Pvu8g0854 620 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0854 620 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0854 620 PANTHER WNK KINASE 4 610 - -
Pvu8g0854 620 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 610 - -
Pvu8g0854 620 MobiDBLite consensus disorder prediction 440 460 - -
Pvu8g0854 620 CDD STKc_WNK 36 296 - -
Pvu8g0854 620 MobiDBLite consensus disorder prediction 441 460 - -
Pvu8g0854 620 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0854 Pvu-Chr8 8150584 8154387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0854 19 436 MAP Kinase Kinase Kinase AT3G51630 66.508 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu8g0854 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0854 K08867 - gmx:100272206 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0854 8 8150584 8154387 Pvu8g0854 8 8150584 8154387 ECH
Pvu8g0854 8 8150584 8154387 Pvu10g0706 10 16852367 16857515 PCT