LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g0838	ATGTGGAGCGTGAATCGGTACTGTGTTTGTGTGCCATTGTTTGTGTGCCTGGTATTGGCTATTGAGCTTGTTGTAGCAAAGGATTTTCAGCCTACAGATAATATTCTGCTGGATTGTGGGGGTCCTTCATCTAGTACTGATACTGATGGCCGTGTATGGACCACTGATGTTGGTTCCAAGTTTGATTCCTCCTCTGCAAAATCCACCACCGTATCGCCGGCGGCAACTCAAGACCCTGCCGTCCCCCAGGTGCCCTACATGACAGCACGCGTGTTCCACGCGCCGTTTACCTATGCTTTCCCGGTGGCTTCCGGTTGGAAGTTCCTCCGGCTGCACTTTTACCCGGCTTCTTACTCCAATCTCAATGCATCTGATGCCCGTTTTGCGGTGACGGCGAATTCATACACGCTTCTTAGGAACTTTAGTGTTGCTCAGACCACCCTGGCTTTGAATTATGCCTACATTTTGAAGGAATTTGCCATCTATGTTGAAGGGAAAACCTTGAATGTGACTTTCACTCCGTCCACCAATGCATCCAATGCTTACGCGTTTGTTAATGGGATTGAGGTTGTGTCTATGCCTGATATTTATACTTCTACTGATGGAACTACCATGATAGTTGGTACAAATACTGCTTACACTATTGACAACAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCCTCCCATGATACTGGTATGTTTAGGTCATGGTCTGATGATGTTCCCTTCCTCTTTGGGGCTGCATTTGGGGTTACTGAGCCCGCTGATCCAGATGTGAAGTTTGAGTATCCTCCGGGCACACCAAGTTATATTGCTCCACTTGATGTCTACACTACAGCCAGATCAATGGGCCCGAATCCGAAAATCAACACAAATTACAACTTGAGTTGGATCTTCAACATTGATTCTGGGTTTTCCTATCTAGTGAGACTCCATTTTGCTGAGGTATCATCAAATATAACCAAGAATAATCAAAGAGTGTTTGATATATTCCTCAACAATCAAACTGCTACACAGGAGGCTGATGTTATTGCCTGGGCAAAAGAATTTGGCCTTTCACATTCTAATGGGGTGCCTGTGCATAAAGATTATGTTGTCTTTATTCCCGAAGATGTAGAACCACGGCAGGACCTGTGGCTTGCATTGCATCCAGATCCAACTGACAAGCCCATGTATTATGATGCAATCTTGAATGGAGTGGAGATTTTCAAAATTAATGATACTGCAGGGAATCTGGCAGGGACAAATCCCATTCCTCCCCCTGTGCAAGACATAATTGACCCATCAACAGCTAGAGCACATAATCATGGTAAATCAAAGAATCATACAGGCATTATTGCAGGAGGTGTTGCTGGAGGAGTTGTTGTAGTACTTTTGATTGGGCTATTTGCTTTTGCTTTATCCCGTAGACAACGAAAGGATTCTGGTGCAAGTGAAGGGCCATCTGGATGGCTTCCACTTTCTCTTTATGGTAATTCACATTCTGCAGCTTCAGCCAAGACCAACACAACAGGAAGTTATGCTTCCTCTCTCCCGTCAAACCTTTGCCGTCATTTCTCATTTGCTGAAATCAAGTCCGCCACAAACAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAGGGAGAAATTGATGGTGGAACAACCAAGGTAGCAATTAAACGTGGGAATCCACTATCTGACCAAGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGTCACCGCCACCTTGTTTCTCTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTCGTTTATGATTATATGGCATATGGAACGCTAAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACTGGTGCTAAATACACAATCATCCACCGTGATGTGAAGACAACAAACATTTTAGTGGACGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTAAGTACTGTAGTAAAGGGTAGCTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTAACTGACAAATCTGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCTCGACCAGCTTTGAACCCGGCCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCTCAAAGGCACTCTTGACCAAATCATTGATCCCTATCTAAAAGGCAAGATAGCTCCAGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCTGACCAGGGTATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAAAGTGCAGAGGAAAGTGGCAACGGCTTTGGCGGCATTGGCAATGAAGTGGAGCCGACATATACAGATTCTAAAGGAAAGAAAGACTCTGATGCGATGGGGGGTTATGATGGTAATGTGACCGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACCCCAAGTGCTGTGTTTTCCCAGATCATGAATCCAAAAGGGCGTTAA	2697	0.4509	MWSVNRYCVCVPLFVCLVLAIELVVAKDFQPTDNILLDCGGPSSSTDTDGRVWTTDVGSKFDSSSAKSTTVSPAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYPASYSNLNASDARFAVTANSYTLLRNFSVAQTTLALNYAYILKEFAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPDIYTSTDGTTMIVGTNTAYTIDNSTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADPDVKFEYPPGTPSYIAPLDVYTTARSMGPNPKINTNYNLSWIFNIDSGFSYLVRLHFAEVSSNITKNNQRVFDIFLNNQTATQEADVIAWAKEFGLSHSNGVPVHKDYVVFIPEDVEPRQDLWLALHPDPTDKPMYYDAILNGVEIFKINDTAGNLAGTNPIPPPVQDIIDPSTARAHNHGKSKNHTGIIAGGVAGGVVVVLLIGLFAFALSRRQRKDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILVDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPALAKEQVSLAEWAAHCYLKGTLDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNGFGGIGNEVEPTYTDSKGKKDSDAMGGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR*	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g0838	898	SUPERFAMILY	Protein kinase-like (PK-like)	514	813	IPR011009	-
	Pvu8g0838	898	PANTHER	OS07G0166700 PROTEIN	20	849	IPR045272	GO:0004714\|GO:0006468
	Pvu8g0838	898	MobiDBLite	consensus disorder prediction	825	898	-	-
	Pvu8g0838	898	ProSiteProfiles	Protein kinase domain profile.	540	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g0838	898	MobiDBLite	consensus disorder prediction	59	77	-	-
	Pvu8g0838	898	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	661	673	IPR008271	GO:0004672\|GO:0006468
	Pvu8g0838	898	MobiDBLite	consensus disorder prediction	59	78	-	-
	Pvu8g0838	898	Pfam	Protein tyrosine and serine/threonine kinase	546	808	IPR001245	GO:0004672\|GO:0006468
	Pvu8g0838	898	SMART	serkin_6	540	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g0838	898	MobiDBLite	consensus disorder prediction	857	891	-	-
	Pvu8g0838	898	CDD	STKc_IRAK	546	812	-	-
	Pvu8g0838	898	Gene3D	Phosphorylase Kinase; domain 1	525	616	-	-
	Pvu8g0838	898	Gene3D	Transferase(Phosphotransferase) domain 1	617	827	-	-
	Pvu8g0838	898	Pfam	Malectin-like domain	37	414	IPR024788	-
	Pvu8g0838	898	Gene3D	-	220	414	-	-
	Pvu8g0838	898	Gene3D	-	34	194	-	-
	Pvu8g0838	898	ProSitePatterns	Protein kinases ATP-binding region signature.	546	569	IPR017441	GO:0005524
	Pvu8g0838	898	PANTHER	-	20	849	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g0838	Pvu-Chr8	7936864	7940382	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g0838	18	898	Receptor kinase-like Gene Family	AT3G51550	74.492	0.0	1317

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pvu8g0838		Malectin_like	5.6e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g0838	-		-	gmx:100499644	1597.02