Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0832 ATGGACAACCTTGGCGTTTCTACGAGTCGTATGAAAGCAATTGAGGAGCTTCTCAGAGGCCGTGATTCTGCTAAACAACTCAGCAGTGTCATCAATGGTAGTGGTGAAAATGGGTCTTCAGCAAATCCTAAGAAACTCGTGAAGGAGGTGCTCATGTCCTTCACCAAGTCCCTCTTGCTCTTGAACAGCGACCCCACTTCTGAATCTCATGATGTCTCCAGTGTTCAAGTTTGGGACTCTCTCAAACAGGAGGACTCTCAAGAGAGCAATTGCAAGAATTCCACCGTTAAATCACGAAGAGGGTGTTACAAGAGAAGCAGAATGGAACAATTAAGAGAGATGGAGTCAGAAGCTCCAATCGATGATGGCCACCAATGGAGGAAGTATGGTCAAAAGGAGATCCTGAATGCCAAATTCCCAAGGAACTACTATAGGTGCACTCACAGAGATCAGGGTTGCTCAGCAAAAAAGCAGGTGCAAAGAGTTGAGGAGGATCCAATCCTGTACAAGACCATCTACCATGGTGACCACACCTGCAAGAGCTTGGAAAACCCTCAGATTATACTTGACCCTGTGTCTCCTTCATCTTCTTCCATGTTCCTTAGCTTTAACAGCTTGGAAAACCCTGTGTTTAACAGCTCTTTTCCTACTCCATCCAAACAAGAGTGCCCCTTTCTCTCATCTTCTTTCACTTCATCTGTCAAAAGGGAGTGCAAGGAGGAGGTTATTCCTCCCTCAACTTCCTCCAATGATTACCTCATCTCTTCTGACCTCACCTTTGATGATTCACCCAGGCATGTCACTCTATCATCATCAACACTTGACTCAGAGTACAAGGGTGTGGACATTTCAGATGTCCTCTATGATTCTGCACAACTTGATCATGTCTTTGAACCCTTCCTTCAATTTAGATAA 915 0.4492 MDNLGVSTSRMKAIEELLRGRDSAKQLSSVINGSGENGSSANPKKLVKEVLMSFTKSLLLLNSDPTSESHDVSSVQVWDSLKQEDSQESNCKNSTVKSRRGCYKRSRMEQLREMESEAPIDDGHQWRKYGQKEILNAKFPRNYYRCTHRDQGCSAKKQVQRVEEDPILYKTIYHGDHTCKSLENPQIILDPVSPSSSSMFLSFNSLENPVFNSSFPTPSKQECPFLSSSFTSSVKRECKEEVIPPSTSSNDYLISSDLTFDDSPRHVTLSSSTLDSEYKGVDISDVLYDSAQLDHVFEPFLQFR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0832 304 ProSiteProfiles WRKY domain profile. 115 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0832 304 Pfam WRKY DNA -binding domain 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0832 304 SMART WRKY_cls 120 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0832 304 MobiDBLite consensus disorder prediction 23 42 - -
Pvu8g0832 304 Gene3D WRKY domain 106 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0832 304 MobiDBLite consensus disorder prediction 25 41 - -
Pvu8g0832 304 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 276 - -
Pvu8g0832 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 276 IPR044810 GO:0003700
Pvu8g0832 304 SUPERFAMILY WRKY DNA-binding domain 116 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0832 Pvu-Chr8 7871958 7873756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0832 10 209 WRKY Transcription Factor Family AT3G56400 35.780 8.63e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0832 WRKY 9.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0832 - - gmx:100170682 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0832 8 7871958 7873756 Pvu8g0832 8 7871958 7873756 ECH
Pvu8g0832 8 7871958 7873756 Pvu10g0599 10 9634279 9635768 PCT