Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0831 ATGAGCTCTGATGAGTCATTGCTATTGGAATCGGATCCGCGTCCTGTGATTCATCACCGCCGCGGGAAATCGGGTTCCCGGACCTACCTCTGTGGCCATGGTTCCTTCTCGTCTTCGGTGTTCGAGGCGGCTCTTGCTGACATCAGCGATTTGGATGTGAAGGAACGAAACAAGGAGGCTGTTTTGGCTAGCGATTGCAGCTTCCACCCTGCGTCGTTTAGTAATAGTAATTGCTCTGATACGTGTGCTGTTGAGTCGAAGTTCCCCTGGGAATGCCCCACGCGCGAGAGGCGGCGCTCTGCATCGTGGGGTGCAATGGAACTGCACGATGCTGATAGCCGGAGCGTGCCCTTTGAGATATCCGGAGGTGCGTCTCATGTGCAGGATAGGTTGAATAGTAAATCTCAGAGGATTAGGCACAGGAGTGTGCAGTTTGATGATCCTGCTTTTCAGGAGGATGGTGCCAGGTTGATCTATATCAATGATCCCAGGAAGACCAACGACAAGTATGAGTTCACCGGGAATGAGATCCGAACTAGTAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTTTTCATTCAGTTTCATAGGGTTGCGTATCTGTATTTCCTTGCTATTGCAGCGCTCAATCAACTTCCTCCGCTGGCTGTCTTTGGGAGGACTGTGTCTCTTTTCCCTCTGTTGTTTGTGCTTTGTGTAACGGCTATTAAGGATGGCTATGAGGATTGGCGGCGGCACAGGTCAGATCGCAATGAAAACAACCGGGAGTCTTTGGTGCTTCAGTCCGGTGATTTCCGATCGAAGAAGTGGAAAAAAATACAAGCTGGGGAGGTTGTGAAGATCTTTGCTGATGAGACAATTCCGGCTGATATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACCATGAATTTGGATGGAGAGTCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCGGTGGTTGCTTCGGAATCTTGTGATGTTTTTGGGGTAATTAGGTGCGAGCAACCGAACCGGAATATTTACGAGTTCACTGCCAATATGGAGTTCAATGGACTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAGCTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCCGGACAGGAAACAAAAGCAATGCTGAACAGTGCAGCTTCTCCATCCAAGAGAAGCAGACTTGAATGTTACATGAACAGAGAAACCCTTTGGTTGTCTGTTTTTCTTTTTATCATGTGTTTGGTTGTGGCCCTTGGGATGTGTCTTTGGCTGGTACGCCACAAGAACCAGCTCGATACCTTGCCTTACTACAGAAAAAGGTACTTCACCAATGGACCCGATAATGGAAAGAGATACAAGTATTATGGGATTCCGATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCACTTTATATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTTATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAACGAAGATTTGGGTCAAATACGCTATATATTTTCGGACAAGACTGGAACACTCACAGAAAACAAAATGGAATTCAGGAGGGCTAGCATACATGGGAAGAATTATGGGAGCTCCTTGCCTATGGTTGATAATACAGCAGCTGCGGATGTTACTCCTAAACGCAGATGGAAGCTCAAATCTGAAATTGCAGTGGATTCTGAACTGATGATAATGTTGCAGGGAAACGCAGATAGAGAAGAAAGAGTTTCTGGTCATGAGTTTTTTCTTACACTGGCTGCTTGTAACACTGTAATCCCTATACATGGTGATGGTGGATTTTCCAGTTGTGGAACAACTGGATTAAATGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCTTCTGCTTATGGATATACTCTTTTTGAACGTACATCAGGACATATTGTTATTGACGTCAACGGTGAGAAACTCAGATTGGATGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCGGTAAAGGTGTTAGTCAAAGGTGCTGATTCTTCAATGTTTAGCATTTTGGAAAATGGCAGAGAGAGTAACAATAGAATACAGCACACAACTCAGAGCCATTTGAATGAATATTCTTCAGAAGGTTTGCGCACTCTTGTAATTGGCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCCGGTACGAGGAGGCAAGTACATCGTTGACTGACCGAGCTACTAAGCTAAGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGTGTACCAGAAGCCATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACCTCAGAGGTCGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGTCGTCGGAGTTTGAAACACAAAACCAATGCTGGGCATGGTGATCTTCTTGATATTCCCAATGGCTTTCCCAAATGGACTCCTGGAAAGGAAGAGGGAACTATTGCTCCATTGGCACTTATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAATTGGAGTCAGAGCTTTTCGATCTAGCAATTTCCTGCAGGGTTGTGCTTTGCTGCCGTGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATCTGATCAAGAGCCGCACAGATGATATGACACTGGCCATAGGCGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGACAGTTTCAGTTTTTAAAAAAATTACTTCTGGTCCATGGGCACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTATTTTGGTATATATTATGCACGGCCTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTGTTCCTACTATTATTGTTGGTATTCAGGATAAGGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATGGTTCAGGCCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACTATGATTGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGACATATGGAGCATGGGTAGTTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGTACACCTTGGTATGGACATCAACCGTTGGGTATTAATCACTCACTTTGCCATCTGGGGATCAATAATCATTACATATGGTTGCATGGTGATATTGGATTCTATACCTGTCTTTCCCAACTACTGGACTATTTATAATCTGGCAAGGTCCCCTACATATTGGGTAACAATTTTGCTTATAATTATTGTGTCATTGCTCCCTCGCTTCATTTGCAAAGTTGTCTATCAAATTTTTTGGCCTTCGGACATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACAGGCTAATTTGCGGCCAAGGCAACAAGTTTCCAGTTAA 3867 0.4352 MSSDESLLLESDPRPVIHHRRGKSGSRTYLCGHGSFSSSVFEAALADISDLDVKERNKEAVLASDCSFHPASFSNSNCSDTCAVESKFPWECPTRERRRSASWGAMELHDADSRSVPFEISGGASHVQDRLNSKSQRIRHRSVQFDDPAFQEDGARLIYINDPRKTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVASESCDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLECYMNRETLWLSVFLFIMCLVVALGMCLWLVRHKNQLDTLPYYRKRYFTNGPDNGKRYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASIHGKNYGSSLPMVDNTAAADVTPKRRWKLKSEIAVDSELMIMLQGNADREERVSGHEFFLTLAACNTVIPIHGDGGFSSCGTTGLNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADSSMFSILENGRESNNRIQHTTQSHLNEYSSEGLRTLVIGSRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGRRSLKHKTNAGHGDLLDIPNGFPKWTPGKEEGTIAPLALIIDGNSLVYILEKELESELFDLAISCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGIQDKDLSHRTLLQYPKLYGSGHRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLGMDINRWVLITHFAIWGSIIITYGCMVILDSIPVFPNYWTIYNLARSPTYWVTILLIIIVSLLPRFICKVVYQIFWPSDIQIAREAELMRKRQANLRPRQQVSS* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0831 1288 Gene3D - 810 1034 IPR023214 -
Pvu8g0831 1288 Gene3D - 657 793 IPR023299 GO:0000166
Pvu8g0831 1288 Pfam Phospholipid-translocating P-type ATPase C-terminal 1022 1262 IPR032630 -
Pvu8g0831 1288 SUPERFAMILY Calcium ATPase, transduction domain A 255 397 IPR008250 -
Pvu8g0831 1288 Pfam Phospholipid-translocating ATPase N-terminal 158 223 IPR032631 -
Pvu8g0831 1288 Gene3D - 231 401 - -
Pvu8g0831 1288 SFLD C1.7: P-type atpase like 529 1045 - -
Pvu8g0831 1288 SFLD p-type atpase 529 1045 IPR044492 -
Pvu8g0831 1288 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 147 1286 - -
Pvu8g0831 1288 ProSitePatterns E1-E2 ATPases phosphorylation site. 547 553 IPR018303 -
Pvu8g0831 1288 MobiDBLite consensus disorder prediction 1 24 - -
Pvu8g0831 1288 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 804 862 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu8g0831 1288 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 960 1080 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu8g0831 1288 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 478 568 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu8g0831 1288 CDD P-type_ATPase_APLT_Dnf-like 174 1154 - -
Pvu8g0831 1288 SUPERFAMILY Calcium ATPase, transmembrane domain M 172 1261 IPR023298 -
Pvu8g0831 1288 SUPERFAMILY HAD-like 532 1038 IPR036412 -
Pvu8g0831 1288 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 172 1269 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu8g0831 1288 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 147 1286 - -
Pvu8g0831 1288 Pfam Cation transport ATPase (P-type) 649 735 - -
Pvu8g0831 1288 PRINTS P-type cation-transporting ATPase superfamily signature 545 559 - -
Pvu8g0831 1288 PRINTS P-type cation-transporting ATPase superfamily signature 994 1013 - -
Pvu8g0831 1288 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 551 827 IPR023299 GO:0000166
Pvu8g0831 1288 Pfam E1-E2 ATPase 256 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0831 Pvu-Chr8 7847795 7860261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0831 135 1271 Primary Pumps ATPases AT5G04930 57.031 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0831 K14802 - gmx:100789830 2308.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0831 8 7847795 7860261 Pvu8g0831 8 7847795 7860261 ECH
Pvu8g0831 8 7847795 7860261 Pvu10g0600 10 9654260 9662183 PCT