Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0827 ATGGTTTCCTCTCAGTTTTCTGGTTTTACAAAGGGCGGTTACAAACCGTCACAGGCTCATTTACTCTTTCCTGCAAACCTTCCTGATACTGTTAACACAGAGCATATTGAGCTAGATTTCTCTGATGTCTTTGGCCCAGTTACTGTAGATTTGAACAACACTGGTGAATCTGTAGAAGAAGTGAATGAGCTGGTTTATGATGACCCACCAGTCATTTACACCCGATCTCATTCTCTGGTTGGCCCTTCATCGTGTGTTAGTCAATCACTTAAGCTTAGCAAACTCACCATACATGAGACTGAGGATTCCTTGGAACTAGTGGATTATGTTGATGGAGAGGCCATTAAGGACATCAAAGAATCTTCCTTTGTTGAAGAGTCTTTGAAAGATGAAGACGGGAATCTCATGAAAAGCCAAGGAGTGGGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCTAAAGTATATCAGGTGAGGAAAAAGGGTACTTCAGAAATATATGCTATGAAGGTTATGCGGAAGGACAAGATTATGGAGAAGAACCATACTGAATACATGAAAGCTGAGAGGGATATTTGGACAAAGTTAGAACACCCTTTTGTTGTTCAACTCAGATACTCTTTTCAGACAAAATACAGACTGTATCTTGTGCTTGATTTTGTAAACGGGGGCCATCTCTTCTTCCAGCTTTATCACCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATACACTGCTGAGATTGTTTCTGCAGTTTCTCATCTCCATTCAAATGGAATAATGCACAGGGATCTAAAGCCTGAAAATATTCTACTGGACGCTGATGGCCATGTTATGTTGACTGATTTTGGTTTAGCAAAACAATTTGAAGAGAGTACAAGATCAAATTCGATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAAGGCCATGATAAGGCTGCTGATTGGTGGAGCGTAGGTGTTCTACTGTTTGAGATGCTTACTGGAAAGCCGCCTTTCTGTGGTGGGAGCCGTGACAAAATTCAGAATAAGATAGTTAAAGACAAGATGAAGCTGCCAGCATTTTTGTCAAGTGAAGCACATTCACTATTGAAAGCGCTGCTACAGAAGGAAGCAACGAAGCGCTTAGGTTTTGGACCCCGGGGGGTTGAGGAAATTAAAGGACACAAGTGGTTTAAACCAATCAATTGGAGAAAGTTGGAAGTACGAGAAATCCAGCCAAGCTTTAGGCCAGAGGTAGCTGGTACGCACTGTGTTGCCAACTTTGAGAAGCGGTGGACTGATATGCCTCTTGAGGACTCTCCAGCTGCCAGCCCAAATGGTGGAAACCCCTTTAAGGACTTCTCTTATGTGAGGCCTGCGCCCTCTTTTCTTCAGAGGAATAGCCCTGCTTACTAA 1428 0.4286 MVSSQFSGFTKGGYKPSQAHLLFPANLPDTVNTEHIELDFSDVFGPVTVDLNNTGESVEEVNELVYDDPPVIYTRSHSLVGPSSCVSQSLKLSKLTIHETEDSLELVDYVDGEAIKDIKESSFVEESLKDEDGNLMKSQGVGIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHTEYMKAERDIWTKLEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYTAEIVSAVSHLHSNGIMHRDLKPENILLDADGHVMLTDFGLAKQFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGVLLFEMLTGKPPFCGGSRDKIQNKIVKDKMKLPAFLSSEAHSLLKALLQKEATKRLGFGPRGVEEIKGHKWFKPINWRKLEVREIQPSFRPEVAGTHCVANFEKRWTDMPLEDSPAASPNGGNPFKDFSYVRPAPSFLQRNSPAY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0827 475 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 473 - -
Pvu8g0827 475 ProSiteProfiles Protein kinase domain profile. 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0827 475 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Pvu8g0827 475 Pfam Protein kinase domain 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0827 475 Gene3D Phosphorylase Kinase; domain 1 143 444 - -
Pvu8g0827 475 Gene3D Transferase(Phosphotransferase) domain 1 226 421 - -
Pvu8g0827 475 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 473 - -
Pvu8g0827 475 ProSiteProfiles AGC-kinase C-terminal domain profile. 403 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu8g0827 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pvu8g0827 475 SMART pkinase_C_6 403 462 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu8g0827 475 CDD STKc_AGC 152 402 IPR045270 GO:0004674|GO:0005524
Pvu8g0827 475 SUPERFAMILY Protein kinase-like (PK-like) 143 464 IPR011009 -
Pvu8g0827 475 SMART serkin_6 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0827 Pvu-Chr8 7811408 7816630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0827 1 472 AGC Kinase Gene Family AT3G08720 69.182 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pvu8g0827 Pkinase 5.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0827 K04688 - gmx:100804819 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0827 8 7811408 7816630 Pvu8g0827 8 7811408 7816630 ECH