Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0826 ATGGCTTCTCTGCTTCCTACAACCGCAACAACACTTCAACATAATCGCACCATCTGCTTCTCTCCTCTCAAACTCACCATCCCAATTACCATTTCCTTCTCAACAAACCGTTTCAAGAGTAGCTCTGGAAAGTGCAATGCAGTTTTTGGTAACATTCCCAAAGACTTGTTGGAGACCACTTTTCACGTGGACCACTTTTCTGTCTTCCAATCACTGTTAGTGAAGTTTCAGAATGTAACTGAAGATTTATCAGACTTGCAGAGGTGGGGGTTTGTGATACTTGCAGGGCTGACATGGGCCTATTTAACTGCAAGGCCGGGTGTTCTTGTCGGCGCCATTGATGCATTCCTTTTGGCCCCTATGCAACTGGTTTTGGACAGTGTATTTGGAAGGAGAAATCTCAAGAGTACTGATTTTCTTATTGGAGATAAACTAGGAGAAGGGTCATTTGGTATTGTTTATTCAGGTGTTTTGGTCCCAAAGAATGTGGATGTACAAGAGTGGATGCAAAAAAATGGAAGAGGCAAGGTCACAAAGTTGGATGCCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTAAAGGTTGGAATTGAAGGGGCAGAGGAATTTGGTGATTTTGAGGAGTGGTTCAATTACAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTTCTTGGAAGTTTTGTAGCTGACAAAGCCAATTCACAGTTCACAAAAGGTGGAAAATGGCTAGTTTGGAAGTTTGAGGGAAGGCGCTCTCTTGCTGATTACATGGCTGATCAAAGCTTCCCATCAAACTTAGAGTCTACCATGTTTGGACGTGTCTTGCAGGGTGTAGACTCTTCAAAACGAAATGCATTGATCATCAAGCAAATAATGCGACAGATCATTACTTCTCTTAAGAAAATTCACGACACTGGAATTGTTCATAGGGATCTTAAGCCTGCCAACTTGGTAGTTACCGAACGGGGGCAGATTAAACTCATCGATTTTGGTGCTGCAACAGACCTTAGAATTGGAAAGAATTATGTTCCCAATCGTACCCCTTTGGATCGTGACTACTGTCCCCCTGAATTGTATGTTCTACCAGAAGAAACCACGAGTCTTCCACCAGAGCCAATTGCAGCTTTCCTTTCACCAGTCATGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCTTACAAATAGCAATTCCAACCTTAAGGTCTTCAGCTGCTTTGAAGAACTTCAATTTGGAGATAAGAACATGTGGATATGATTTAAACAAATGGAGAGCGTCTACTCGCATGAGGTCTGACTTCCAAATTCTTGATAGTGACTCTAGAAGAGGTTGGGACTTGGCAACAAAGCTTATCTCCAAGAGAGGTTCCCAATTAAGAGGACGTTTATCTGCTGCTGCTGCTTTGAGGCATCCTTATTTCCTTCTGGGTGGGGATCAGGCCGCCGCAGTCCTTTCAAAACTAAGCTTTTAA 1497 0.4262 MASLLPTTATTLQHNRTICFSPLKLTIPITISFSTNRFKSSSGKCNAVFGNIPKDLLETTFHVDHFSVFQSLLVKFQNVTEDLSDLQRWGFVILAGLTWAYLTARPGVLVGAIDAFLLAPMQLVLDSVFGRRNLKSTDFLIGDKLGEGSFGIVYSGVLVPKNVDVQEWMQKNGRGKVTKLDAKSKDKVILKKVKVGIEGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKANSQFTKGGKWLVWKFEGRRSLADYMADQSFPSNLESTMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHDTGIVHRDLKPANLVVTERGQIKLIDFGAATDLRIGKNYVPNRTPLDRDYCPPELYVLPEETTSLPPEPIAAFLSPVMWQLNSPDLFDMYSAGIVLLQIAIPTLRSSAALKNFNLEIRTCGYDLNKWRASTRMRSDFQILDSDSRRGWDLATKLISKRGSQLRGRLSAAAALRHPYFLLGGDQAAAVLSKLSF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0826 498 ProSiteProfiles Protein kinase domain profile. 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0826 498 SUPERFAMILY Protein kinase-like (PK-like) 136 483 IPR011009 -
Pvu8g0826 498 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 498 IPR044803 GO:0004674|GO:0009579
Pvu8g0826 498 Gene3D Transferase(Phosphotransferase) domain 1 278 484 - -
Pvu8g0826 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Pvu8g0826 498 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 498 - -
Pvu8g0826 498 Gene3D Phosphorylase Kinase; domain 1 127 249 - -
Pvu8g0826 498 SMART serkin_6 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0826 498 Pfam Protein kinase domain 289 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0826 Pvu-Chr8 7805747 7810334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0826 270 496 EF-hand Containing Proteins AT4G21940 28.870 8.29e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pvu8g0826 Pkinase 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0826 - - gmx:100795624 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0826 8 7805747 7810334 Pvu8g0826 8 7805747 7810334 ECH
Pvu8g0826 8 7805747 7810334 Pvu10g0602 10 9673046 9674710 PCT
Pvu10g0601 10 9662895 9664966 Pvu8g0826 8 7805747 7810334 PCT